Bacillus subtilis subsp. subtilis 168: BSU07560
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Entry
BSU07560 CDS
T00010
Symbol
pel
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bsu
Bacillus subtilis subsp. subtilis 168
Pathway
bsu00040
Pentose and glucuronate interconversions
bsu01100
Metabolic pathways
bsu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BSU07560 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSU07560 (pel)
Enzymes [BR:
bsu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BSU07560 (pel)
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
936113
NCBI-ProteinID:
NP_388637
Pasteur:
BG10840
UniProt:
P39116
A0A6M4JL16
Structure
PDB
PDBj
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Position
827993..829255
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AA seq
420 aa
AA seq
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MKKVMLATALFLGLTPAGANAADLGHQTLGSNDGWGAYSTGTTGGSKASSSNVYTVSNRN
QLVSALGKETNTTPKIIYIKGTIDMNVDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGK
KEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKSDNVIIRNIEF
QDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKY
QHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQR
APRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTISVF
SGGTALYDSGTLLNGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtgatgttagctacggctttgtttttaggattgactccagctggcgcgaac
gcagctgatttaggccaccagacgttgggatccaatgatggctggggcgcgtactcgacc
ggcacgacaggcggatcaaaagcatcctcctcaaatgtgtataccgtcagcaacagaaac
cagcttgtctcggcattagggaaggaaacgaacacaacgccaaaaatcatttatatcaag
ggaacgattgacatgaacgtggatgacaatctgaagccgcttggcctaaatgactataaa
gatccggagtatgatttggacaaatatttgaaagcctatgatcctagcacatggggcaaa
aaagagccgtcgggaacacaagaagaagcgagagcacgctctcagaaaaaccaaaaagca
cgggtcatggtggatatccctgcaaacacgacgatcgtcggttcagggactaacgctaaa
gtcgtgggaggaaacttccaaatcaagagtgataacgtcattattcgcaacattgaattc
caggatgcctatgactattttccgcaatgggatccgactgacggaagctcagggaactgg
aactcacaatacgacaacatcacgataaacggcggcacacacatctggattgatcactgt
acatttaatgacggttcgcgtccggacagcacatcaccgaaatattatggaagaaaatat
cagcaccatgacggccaaacggatgcttccaacggtgctaactatatcacgatgtcctac
aactattatcacgatcatgataaaagctccattttcggatcaagtgacagcaaaacctcc
gatgacggcaaattaaaaattacgctgcatcataaccgctataaaaatattgtccagcgc
gcgccgagagtccgcttcgggcaagtgcacgtatacaacaactattatgaaggaagcaca
agctcttcaagttatccttttagctatgcatggggaatcggaaagtcatctaaaatctat
gcccaaaacaatgtcattgacgtaccgggactgtcagctgctaaaacgatcagcgtattc
agcgggggaacggctttatatgactccggcacgttgctgaacggcacacagatcaacgca
tcggctgcaaacgggctgagctcttctgtcggctggacgccgtctctgcatggatcgatt
gatgcttctgctaatgtgaaatcaaatgttataaatcaagcgggtgcgggtaaattaaat
taa
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