Bacillus subtilis subsp. subtilis 168: BSU13410
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Entry
BSU13410 CDS
T00010
Symbol
ykoV
Name
(RefSeq) DNA repair protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
bsu
Bacillus subtilis subsp. subtilis 168
Pathway
bsu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BSU13410 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsu03400
]
BSU13410 (ykoV)
DNA repair and recombination proteins [BR:
bsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BSU13410 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF6058
Motif
Other DBs
NCBI-GeneID:
939375
NCBI-ProteinID:
NP_389224
Pasteur:
BG13265
UniProt:
O34859
A0A6M3ZDH7
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Position
complement(1406357..1407292)
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AA seq
311 aa
AA seq
DB search
MNRTPSLHTKEKKGFIDMHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIK
YEKVCTNCEKTLSPDEIVKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQEID
PIYFNRSYFVGPGDNGTKAYTLLREALRSTGKIGIANMTIRSKQQLAILRVYENCIVMES
IHYPDEVRSAAQVPGVPDQSNVNDKELQTAITLIDELTAKFEPEKYEDTYRQALLQRVND
KLENKETAVTPDKAPPREDVIDLVSALQASIDRTRRPNRETPAAAPAQAAEPKGAGDKKQ
KTTRKKASGTS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtactccttctcttcacactaaagaaaaaaaggggtttatcgatatgcataca
atgtggaagggatcgatcagcttcggattagtaaacatccccatcaagctatatgcggcc
acagaagataaagatattaaactgcgcagcctccataaagaggatcacgcaccaatcaaa
tacgagaaagtttgcacaaattgcgaaaaaactcttagtcctgatgaaattgtgaaggga
tatgaatatgtaaaaggaaaatatgtagtgctgacagacgaagatttaaaaagcttaaaa
caggagcatgaggagaaagcagttgagattgttgactttgttcagcttcaggaaattgat
ccgatttattttaaccgctcctactttgtcggccccggggataatgggacgaaggcctat
accctgctgcgtgaggcgctgcgctcaaccggaaagatcggtatcgccaatatgacaatc
aggtcaaagcagcagctggcgattctccgcgtttatgaaaattgtatcgtcatggagtct
atccattatcccgatgaggtcagaagcgccgctcaagtcccaggtgtacctgatcaatcg
aatgtaaacgataaggaactgcaaactgctatcacattaatagatgaactgactgctaag
tttgagcctgagaaatatgaagacacgtaccgacaggcgctgctgcaaagagtcaacgac
aagctagaaaataaagaaacggctgtcactcctgataaagcgccacctcgtgaagatgtc
attgacctggtaagcgctctgcaagccagcatcgacagaaccagaaggccgaaccgggag
acaccggctgccgcacctgcacaagccgctgaaccgaaaggagccggagataaaaaacaa
aaaacaactagaaaaaaagcctccggcacatcatag
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