Bacillus subtilis subsp. subtilis 168: BSU37080
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Entry
BSU37080 CDS
T00010
Symbol
rho
Name
(RefSeq) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bsu
Bacillus subtilis subsp. subtilis 168
Pathway
bsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSU37080 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsu03021
]
BSU37080 (rho)
03019 Messenger RNA biogenesis [BR:
bsu03019
]
BSU37080 (rho)
Transcription machinery [BR:
bsu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BSU37080 (rho)
Messenger RNA biogenesis [BR:
bsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSU37080 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA_22
AAA
NACHT
EZH2_WD-Binding
AAA_25
Motif
Other DBs
NCBI-GeneID:
937042
NCBI-ProteinID:
NP_391589
Pasteur:
BG10416
UniProt:
Q03222
LinkDB
All DBs
Position
complement(3803400..3804683)
Genome browser
AA seq
427 aa
AA seq
DB search
MKDVSISSLENMKLKELYELARHYKISYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRQMVLETKPNFLSTRIMDMMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITANQPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWSIRKTMSDSPDFAEKFMRKMKKTKTNQEFFDILNQEWKQA
NLSSARR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtatctatttcctctttggaaaatatgaaattgaaagagctttatgaactt
gcaagacattataaaatctcctattacagcaaactgacaaaaaaagaactcattttcgcc
attctgaaagcgaatgcagaacaggaagatctgctgtttatggaaggcgttctcgagatc
atccagtctgaaggtttcggattcctgagaccgatcaactactctccaagctcagaagac
atttacatctcagcttcacaaatccgccgtttcgatttgcggaacggagacaaagtatct
ggcaaggttcgcccgccaaaagaaaatgagcgttactatggacttttgcacgttgaagca
gtaaatggggatgatcccgaatctgcaaaagagcgtgtgcatttcccggctcttacgcca
ctttatccggatcgtcaaatggtgcttgaaacaaagccgaacttcttgtctacaagaatt
atggacatgatggcgccggttggatttgggcagcgcggattgattgttgcgccgccgaaa
gccggaaaaacgatgttgctgaaggaaattgccaacagcattacagcgaaccagcctgaa
gcagagctgatcgtgcttttaattgacgaaagacctgaggaagtaaccgatatcgagcgc
tctgtagctggggatgtcgtcagctcaacgtttgatgaagtgccggaaaaccatatcaaa
gtggccgagcttgtgcttgaacgtgcgatgcgtctcgtggaacacaaaaaagacgtcatt
atcctgatggacagcatcacacgtcttgcccgcgcctacaacttagtgattccgccaagt
ggaagaacgctttccggggggattgacccagcggcgttccaccgtccgaaacgcttcttt
ggggctgcgagaaatatcgaagagggcggcagcttaaccatccttgctacggctctggtc
gatacaggttcacgtatggatgatgtcatttatgaagaattcaagggaacaggcaacatg
gagctccatcttgaccgctctcttgccgagcgccgcatcttccctgccatcgatatccgc
cgttcaggaacgcgcaaagaagagctgcttgtgcctaaagagcatcttgatcgtttatgg
tctatccgcaaaacgatgtctgattcacctgatttcgcagaaaagttcatgagaaaaatg
aaaaaaaccaaaacaaaccaggaatttttcgatattctcaatcaagaatggaaacaggca
aatctatcatctgcaagaaggtaa
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