Bacillus subtilis subsp. subtilis 168: BSU38360
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Entry
BSU38360 CDS
T00010
Symbol
ywbD
Name
(RefSeq) ribosomal RNA large subunit methyltransferase YwbD
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
bsu
Bacillus subtilis subsp. subtilis 168
Brite
KEGG Orthology (KO) [BR:
bsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsu03009
]
BSU38360 (ywbD)
Enzymes [BR:
bsu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
BSU38360 (ywbD)
Ribosome biogenesis [BR:
bsu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BSU38360 (ywbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Met_10
tRNA_Me_trans
PUA
MTS
Motif
Other DBs
NCBI-GeneID:
937328
NCBI-ProteinID:
NP_391715
Pasteur:
BG10565
UniProt:
P39587
A0A6M3ZHK6
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Position
complement(3935824..3937014)
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AA seq
396 aa
AA seq
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MKLLTLKKAHAAKIKKGYPLIEKEALAGSAGHMKEGDLVDIVSESGGEFLARGYYGLQNK
GVGWTLTRNKHEQIDQAFFLSKLTKAAQARAKLFEAQDTTAFRLFNGEGDGVGGVTIDYY
DGYLLIQWYSKGIYTFKDMLISALDEMDLDYKAIYEKKRFDTAGQYVEDDDFVKGRRGEF
PIIIQENGIQYAVDLNEGAMTGIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSVAAAL
GGAEKTTSVDVANRSLAKTIEQFSVNKLDYEAHDIKVMDVFNYFSYAAKKDLRFDLIILD
PPSFARTKKRTFSAAKDYKNLLKETIAITADKGVIVASTNSSAFGMKKFKGFIDAAFKET
NERYTIIEEFTLPEDFKTISAFPEGNYLKVVLLQKK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaagctactcaccctaaaaaaagcacacgctgccaaaataaaaaaaggctatcccctt
attgaaaaagaagctctcgcagggagtgcggggcacatgaaagaaggagacctcgttgat
atcgtgtctgagagcggcggcgagtttctcgcgcggggctattacggcctgcaaaacaaa
ggggttggctggacgcttacccgcaataaacatgaacagattgaccaagcattttttctc
agcaaattaacaaaagcggcccaagcgcgcgccaaactatttgaggctcaagatacaaca
gctttccgcctgttcaacggtgagggtgacggtgtcggcggcgtcaccatcgactattat
gacggctacctgctgattcaatggtacagcaagggaatttacacctttaaagacatgctg
atttccgcattggatgagatggatcttgattataaagcgatttacgagaagaaacgcttc
gacacggctggacaatacgttgaagatgatgacttcgtgaaagggagaaggggcgagttc
ccgatcatcatccaagagaatggcattcaatacgcggtggatctgaatgaaggcgccatg
acgggcatctttttggatcagagacatgtgcgcaaggcgatcagagaccgctatgcaaaa
gggaaaaccgttttaaatacgttttcttatacgggtgcattctccgtggcggcggcgctt
ggcggagcggagaaaacaacaagcgtcgacgtggcaaatcgaagtcttgccaaaacgatc
gagcaattcagcgtgaacaagctggattacgaagcgcacgacattaaagtgatggacgtt
tttaactatttttcatatgctgcaaaaaaggatttgcgctttgatctgattattctagat
ccgccttcctttgcgcgcacaaaaaaacgcaccttcagcgcggccaaggattataaaaac
ctgctgaaggaaacgatcgccatcactgctgacaagggtgtcattgttgcctctacaaac
agcagcgcctttggcatgaagaagttcaaaggctttattgatgccgcctttaaagaaaca
aatgaacgctacacgatcattgaggaatttacgctgccggaggatttcaaaacgatttcg
gcatttccggaaggcaactacctgaaagtggtccttctgcagaaaaaataa
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