Bifidobacterium subtile: BS3272_00880
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Entry
BS3272_00880 CDS
T07068
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bsue
Bifidobacterium subtile
Pathway
bsue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BS3272_00880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsue03019
]
BS3272_00880
03016 Transfer RNA biogenesis [BR:
bsue03016
]
BS3272_00880
Enzymes [BR:
bsue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BS3272_00880
Messenger RNA biogenesis [BR:
bsue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BS3272_00880
Transfer RNA biogenesis [BR:
bsue03016
]
Prokaryotic type
tRNA degradation factors
BS3272_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
S1_RRP5
DAXX_hist_bd
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QOL36599
LinkDB
All DBs
Position
188517..191138
Genome browser
AA seq
873 aa
AA seq
DB search
MEGPEIKAAEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMVLSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSTEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDMIALNAASASTLISGLPFGGPVSGVRLALVDGQWVAFPRWSERDR
AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWTLIYDEGQTKPDEEVVAGGLEAAKPFIKA
ICEAQNELKAQVSKETKDFPLFPEYTDALYARIDEIAHEQLNEALSIAEKLPRQERLHEI
KNSVRETLAGEFTEMDPAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDAISGPQTKRYMHNYEMPPYSTGE
TGRVGSPKRREVGHGALAEKALVPVLPDREEFPYAIRQVSEAIGSNGSTSMGSVCASTMS
LLASGVPLKAPVAGIAMGLVSGDVDGQHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADVLASALNQAKEARTTILEVINECIDCPAEMSPTAPRIITTTVPVDKIG
EIIGPKGKMINQIQEDTGASIAIEDDGTVYISSEGGEAAEKAKGIIDSIANPHVPQAGET
FNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLTDGERVEAVEDVLKEGDTVEVIVQSVD
DRGKISLAIPGFESQESSAPRRSRDDRDDRRGGRDDRGYRGRRDDRDYDDRPRRSHDDRG
DRGDRYERRDDRHDDRRDDRHDDRGGYGDRPRRSHDDRSDRDDRRGGYRGGRRNDRNPRY
AADDHYDEYSADRAERSERPRRRVRRDFDPFED
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtcccgaaatcaaggccgctgaggccgttattgacaatggttcatttggcaag
cgcacattgcgcttcgagacgggtcgcttggcccagcaggcggacggcgcagtagccgcc
tacctcgacgacgattcgatggtgctttccaccacgaccgccggatccagccccaaggag
aactacgacttcttcccgctgaccgtcgacgtcgaagagaagatgtacgccgcgggcaaa
atccccggctcgttcttccgccgcgaaggccgcccgtcgaccgaggccatcctggcttgc
cgcatcatcgatcgcccgctgcgccccctgttcccgcacacgctgcgcaacgaggtgcag
gttgtggagaccgtgctcgccgtcaacccggacgacgcctatgacatgatcgcgctgaac
gccgcttcggcatccacgctgatctccggcctgcccttcggtggcccggtctccggcgtg
cgcttggcgctcgtcgacggccagtgggtcgccttcccgcgttggagtgagcgcgatcgc
gccgtcttcgagatcgtggtcgcaggccgcgtcatcgagaacggtgacgtcgccatcgcc
atgatcgaggccggcgccggcaagaacgcctggaccctcatctacgacgagggccagacc
aagcccgacgaggaagtagtcgctggcggtctggaagccgcgaagcccttcatcaaggct
atctgcgaggcgcagaacgagctgaaggctcaggtctccaaggagaccaaggacttcccg
ctcttcccggagtacaccgacgcgctgtatgcgcgcatcgacgagattgcccacgagcag
cttaacgaggcgctttccatcgcggagaagctgccgcgccaggagcgtctgcacgagatc
aagaactccgtgcgcgagacgcttgccggcgaattcaccgagatggatccggccgagaag
gacaaggagctgggcaacgccttcaaggagctgcagcgccagatcgtccgccgccgcatc
ctgaccgaggactaccgcatcgacggccgcggcctgcgcgacatccgcacgctgtccgcc
gaggtcgacatcgtgccgcgcgtccacggctccgcgctcttccagcgcggcgagacccag
attctgggcgtcacgacgctgaacatgctcaagatggagcagcagatcgacgccatctcc
ggaccgcagaccaagcgctacatgcacaattacgaaatgccgccgtattcgaccggtgag
accggtcgcgtcggctcacccaagcgccgcgaagtcggccacggcgcgctcgccgagaag
gcgctggtgccggtgctcccggaccgcgaggagttcccctacgccatccgtcaggtctcc
gaggccatcggctccaacggctccacctcgatgggctccgtgtgcgcttcgaccatgtcg
ctgcttgcctccggcgtgccgctcaaggccccggtcgcgggcatcgcgatgggtctggtc
tccggtgatgtcgacggacagcatatcttcaagacactgaccgacatcctgggcgcggaa
gacgccttcggcgacatggacttcaaggtggcgggaacctccgagttcatcaccgccctg
cagcttgataccaagctcgacggcatccccgccgacgtgctggcttcggcgctgaaccag
gccaaggaagcccgcacgacgatcctcgaagtcatcaacgagtgcatcgactgcccggcc
gagatgagcccgaccgcgccgcgcatcatcaccacgaccgttccggtcgacaagatcggc
gagattatcgggcccaagggcaagatgatcaaccagatccaggaagacaccggcgccagc
atcgccatcgaggatgacggcacggtctacatctcctccgaaggcggcgaggccgcggaa
aaggcgaagggcatcatcgattccatcgccaacccgcatgtgccgcaagccggagagacc
ttcaatggcaaggtcgtcaagacgacgagctttggtgcgttcgtgaacctgacgcccggc
accgacggcctgctgcatatctcgcagatccgcaacctgactgacggcgagcgcgttgaa
gcggtcgaggacgtgctcaaggaaggcgacaccgtcgaggtgatcgtgcagagcgttgac
gatcgcggcaagatctcgctggccatccccggcttcgaaagccaggaatcctcggctccg
cgccgttcgcgcgacgatcgtgacgaccgccgtggcggacgtgacgaccgtggctatcgt
ggacgtcgcgatgatcgcgactacgatgaccgtccgcgtcgttcgcatgacgaccgtgga
gatcgcggcgaccgctatgagcgtcgtgacgatcgccatgatgaccgtcgtgacgaccgt
cacgacgaccgcggtggctatggcgatcgtccgcgtcgttcgcatgacgaccgctcggat
cgtgatgatcgccgtggcggctaccgtggtggccgtcgcaacgaccgcaacccgcgctac
gccgccgacgatcactacgacgagtacagcgccgaccgcgccgagcgttcggagcgtccg
cgccgtcgcgtacgtcgcgacttcgatcccttcgaggactga
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