Bifidobacterium subtile: BS3272_02090
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Entry
BS3272_02090 CDS
T07068
Name
(GenBank) DEAD/DEAH box helicase
Organism
bsue
Bifidobacterium subtile
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
SWIM
ERCC3_RAD25_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOL36794
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All DBs
Position
451197..455783
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AA seq
1528 aa
AA seq
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MDWHASVYGSRTGREGGYGAYDDDESGFDGDDDGIAYGAQEIISDRRLKQLGGSAYYRAY
EVISSGRMHDMSVADDEETPNGLLLSAYVDSADGYSDDYEVSVVVDEQNDEVSDADCTCP
AFGRYGAICKHVIAVIMQYNEDSGLFELQGGPLRRSPTHDTTRLLKTFMGKQDREMQEQA
RKRHLALLKTVNGEAASAKKRPTAASAAMQHMPIGSVALRPTIGRSMGAWYLRLRIAAPS
RSASYVIKDIGSLLQSVRQNEPVTYGKKLAFVHTIDSFDERSRRMLAVLGRAVDIRRSVG
GVVRRSMSSETGGGDMTLSDDEIADILDLYVEDAAAADKAHQNAEVFSRRTSKAGRAAGS
GGRDVSEDVEDRAVGYVPRGVWFTHATFARVKNGDPDLGLHIVCAGGAKPPELEQPASAS
ASASLASAAATRRLEAALSTSNSVPSTRATQAARAGRTAGSGSAMRGTMPAKHARENETP
GPTGFVIRHTRSIEDVVAGSHSRYVMVREGGGGAGDAVDGMFSHTQTDAHVTIYRCSEAF
YRNRKLAQTLCGNGEEGELFLAQDDVEAFSRTVLPFLDAVEDDAADNAVAAEDHSKTLTR
AGREDPVDGRDDGHAAGLADYGPVGGPAAKHAVDGANGVGDANSIGITGKDEDRAGHLHD
GLRVRLPAELLQRKPEPCQIEIYLDRDRSVGGITCDVQARYGEQRFHVFDGIPADGVTDG
VARDRQSERLAVEAVRHYFPMPQGNIAFLPENNDEAIYKLISEGLPVLRSLGSVFSTPSF
DGLTSAPRPNIKVGLSLRSGLVEISPIADEIDPDDVPALLNSYRKRRRFHRLRNGAFIDM
RDVDAGAVDELASDLGLSASAFDKGSVAVPAYEAYYLDHQVDDADKSEGFKDYLDELRVI
DPKTYQVPESLREVLRPYQAEGFRWLSAVCDKGFGGILADEMGLGKTVQLLSLLVARREE
SRKAGPSLIVCPASLVYNWAAECERFAPELNVLAVAGNKASRRAMLDEAKARYAGIAQSR
RANAVAGAKRALSVAGDGIASDGNTYDRDAYPAAAADAAASNDMVFGETAGGASIASVVD
IAGAGAGDADADASAASAAGWQGARTVPQPDRIDRVPDVLITSYDMLRRDIADYRGLECF
CMVLDEAQYIKNHATKASKAVRSVNTRHRFALTGTPIENRLSELWSIFDFLMPGILGSYA
HFRERFEMPILSDDEEAQGKLQAFVGPFILRRLKADVLKDLPDKIENVIAVPLEGEQRHL
YAALEQRLRATLLKQRDIEFATGKIQILAQLTRLRQACCDPRLLYSNVGENEVEANAKAW
GMPARTLEESQEATAKRELAASASSTASGRKSREVPSAKLDAIEELVSSCQDAGRKMLIF
SQFTSYLDLIAERLRADGVNYDVITGATLKKRRVELVDQFNRDDTPVFLISLKAGNTGLN
LTGACVVVHADPWWNAAAQDQATDRAHRIGQTQDVNVYQIVAKDTIEERILALQQSKSDL
ASRFVDSASSSGAAVSRLTKDDLLALLG
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
ttggattggcatgcctcggtatacgggtcgcgcaccggccgcgaaggcgggtacggcgcc
tacgatgatgacgagtccggcttcgatggggacgacgacggcatcgcctatggcgcacag
gagatcatatccgaccgcagactcaagcagttgggcgggtcggcgtattaccgcgcctac
gaggtcatatccagcggccgcatgcacgacatgtccgtcgccgatgatgaggagacgccg
aacgggctgctgctttcggcctatgtggacagcgccgatggttacagcgatgattacgaa
gtcagcgtggtcgtcgacgagcagaatgacgaggtgagcgacgctgattgcacgtgcccg
gctttcggccgctacggagcgatctgcaaacatgtgatcgctgtgatcatgcagtacaac
gaggattccggcctcttcgagctgcagggcgggccgctgcggcgctcgccgacgcatgac
accacgcgcctgctgaagaccttcatgggcaagcaggatcgcgagatgcaggagcaggcc
agaaaacgccatcttgcgctcctgaaaacagtgaatggcgaggcggcatcggccaaaaag
aggccgacggctgcttcggcggcgatgcagcatatgcccatcggcagcgtggcgctgcgt
ccgaccatcggccgatcgatgggcgcatggtatctgcgcttgcgcatcgccgcgccaagc
cgttccgcgtcatacgtcatcaaggatatcggctcgctgctgcagtcggtgcgccagaac
gagccggtgacctatggcaagaagctcgccttcgtgcacaccatagattccttcgatgag
cgctcgcgccggatgctcgcggtgctcggacgtgccgttgacatccgtcgcagcgtggga
ggagtggtgcgccgcagcatgtcttccgaaacgggcggcggcgatatgacgctttccgat
gacgaaatcgccgatatcctcgatctgtatgtcgaagacgctgcggctgcggataaggct
catcagaatgcagaggtcttctctcggcgcacgtcgaaggccgggcgggctgccggttcc
ggcgggcgggacgttagcgaggacgtcgaggaccgcgcagtcgggtacgtcccgcgcggc
gtgtggttcacccacgccacgtttgcgcgagtcaagaacggcgaccctgatctggggctg
cacatcgtgtgcgccggcggggcgaagccgcccgagctggagcagccggcatcggcatcg
gcatcggcgtcattggcgtcagcggcggcgacaaggcggctggaggcggcgctgtcaacg
tcgaacagcgtgccgtcgacacgcgcaacgcaggcggcccgtgcaggcaggaccgccgga
tcgggcagcgcaatgcgtggcacgatgccggcgaagcatgcgcgagaaaacgaaacgcct
gggcccacgggcttcgtgatccgccacacgcgatccatcgaggacgtggtggcgggaagc
cattcgcgctatgtgatggtgcgtgagggcggcggtggcgccggcgatgctgttgacggc
atgttctcccatactcagaccgatgcgcatgtgaccatatatcgttgctcggaggcgttc
taccgcaatcgaaaactcgcgcagaccctgtgcggcaacggcgaggaaggcgagcttttc
ctcgcgcaggatgatgtggaggcgttttcgcgcacggtgctgccgttccttgatgcagtt
gaggacgatgctgctgacaatgctgtggcggcggaagatcacagcaagacgctgaccaga
gccggtcgggaggacccggtcgatgggcgtgatgacggccatgctgccggacttgccgac
tacggacctgtcggcgggccggctgccaagcacgccgttgacggagcaaacggcgttggc
gacgccaacagcataggcatcaccggcaaggatgaggaccgtgccggccatcttcatgac
ggcctgcgcgtgcgcctgcctgctgagctgctgcaacgcaagcccgagccgtgccagatc
gaaatctatctcgatcgcgaccgctccgtgggtgggatcacctgcgatgtgcaggcgcgg
tacggcgagcagcgattccacgtgttcgacggcatccctgcggatggcgtcaccgatggc
gtggcgcgtgaccggcagagcgaacggcttgccgtcgaggcggtgcgccactacttcccc
atgccgcagggcaatatcgcgttcctgccggagaacaatgacgaggcgatctacaagctc
atcagcgagggattgccggtgctgcgctcgctcggctctgtattctcgacgccgtccttc
gacggactgacgtcagccccgcggccgaatatcaaggtcgggctgtcgctgcgttccgga
ttggttgagatatcaccgatcgccgacgaaatcgatcctgatgacgtgcctgcgctgctc
aacagctatcgcaaacgccgccgcttccaccgcctgcgcaacggggctttcatcgacatg
cgcgatgtggacgccggcgctgtcgacgagcttgcttctgatctggggctttccgcttcg
gcctttgacaagggctcggtggcggtgcccgcctacgaggcctactatctcgatcatcaa
gtggatgatgccgacaaatccgagggattcaaggactacctcgacgagctgcgggtgatc
gacccgaagacctatcaagtgcccgagtcgctgcgcgaggtgctcaggccatatcaagct
gagggattccggtggctgagcgcggtgtgcgacaagggcttcggcggcattctggccgat
gagatgggtctgggcaagaccgtgcagctgctatcgctcttggtggcgaggcgtgaggag
agccgcaaggcaggcccgagcctcatcgtgtgcccggcgtcgctggtctacaactgggcg
gcggaatgcgagcgattcgcgcccgaattgaatgtgctggctgtcgcaggtaataaggcc
tcgcgacgtgccatgcttgacgaggccaaggcgcggtatgccggcattgcgcaatcccga
cgagccaacgccgtagcaggggctaagagggcgttgagcgttgcaggtgacggcattgcc
agtgacggcaacacgtatgaccgtgatgcgtatcccgcagccgcagccgatgccgctgcg
tcgaacgacatggtgttcggtgagacagcgggcggcgccagtatcgccagtgtcgtcgat
atcgccggcgccggcgctggcgatgccgatgccgatgccagcgccgcctcggccgccggc
tggcaaggagcacgaactgtgccgcagcccgaccgcattgaccgcgttcccgatgtgctt
atcacgtcatacgatatgctgcgtcgtgatattgcagactaccgggggctcgaatgcttc
tgcatggtgctggacgaggcgcaatacatcaagaatcatgcgaccaaggcttcgaaggcc
gtgcgctccgtgaacacccgtcaccgcttcgcgctcaccggcacgcccatagagaatcgg
ctctcggagctgtggagcatcttcgatttcctgatgcccggcattctgggatcgtacgcg
cacttccgcgagcgcttcgaaatgcctattctgagcgacgacgaggaggcgcaaggcaag
ctgcaggccttcgtggggccgttcattctgcgccggctcaaggcggatgtgctcaaggat
ctgcccgacaagatcgagaacgtcatcgccgtgccgctggaaggcgagcagcggcatttg
tacgcggcgcttgagcagcgactgcgcgcgacgctgctcaagcagcgcgacatcgaattc
gccaccggcaagattcagattctcgcgcagctcacacggctgcggcaagcctgctgcgac
ccgagactgctgtactccaatgtgggcgagaatgaagtcgaggcgaatgcaaaggcctgg
ggtatgccggcccgcacgcttgaggaatcgcaggaggcaactgcgaaacgcgagttggcg
gcttcggcgagctcaacagcatcgggcaggaagtcccgcgaagtcccatccgccaaactc
gatgccatcgaggagctggtgtcaagctgccaggatgcggggcgcaagatgctcattttc
tcgcagttcacgagctatctggacctgattgccgaacgtctgcgcgcggacggcgtgaac
tatgacgtcatcacgggcgccacactgaagaagcgccgcgtcgagctggtcgaccagttc
aaccgcgacgatacgccggtgttcctcatctcgctcaaggccggcaacacggggctgaat
ctgaccggggcctgcgtcgtggtgcacgccgacccgtggtggaacgccgccgcgcaggat
caggccaccgaccgcgcccaccgcatcggccagacgcaggatgtcaacgtctaccagatc
gtcgccaaggacaccatcgaagagcgcatcctcgccctgcagcagtccaaaagcgacttg
gcctcacgcttcgtcgattcggcgtcgtcatccggcgcggccgtctcccggctcaccaag
gacgatctgctggcgctgctgggctag
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