KEGG   Bifidobacterium subtile: BS3272_02650
Entry
BS3272_02650      CDS       T07068                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
bsue  Bifidobacterium subtile
Pathway
bsue02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bsue00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BS3272_02650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsue03021]
    BS3272_02650
Transcription machinery [BR:bsue03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BS3272_02650
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 DprA_WH HTH_20
Other DBs
NCBI-ProteinID: QOL36877
LinkDB
Position
596821..598236
AA seq 471 aa
MATKETTAIMEQADQATGSDPSKKAAPARKASAKKTKAASATTAKKTPAKSAAEPVRSGN
AHARGEDEVLDKDQVDNDEDIEDMDAIDADDDADDDDQLDADSDDDADDDSDDAGDGDHD
DDGEDEEKHVEEPVVPKAKGVFVVRDDDDDENLTPSGNPKRRVVAAGATADPVKDYLKQI
GRVSLLNAEQEVDLSERIEAGLYAQHLLDAESEGMEFRRKRELKWAANDGKKAKDHLLEA
NLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRA
MADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGR
EPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMR
YGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq 1416 nt   +upstreamnt  +downstreamnt
ttggccacgaaggaaacgacggcgatcatggaacaggctgaccaggctaccggcagtgac
ccctcgaagaaggccgcgccggcgaggaaggcctcagcgaaaaaaacgaaggccgcctcc
gcaaccactgcgaagaagacgccggcaaaatcggcagctgaaccggtgcgctccggcaat
gctcatgctcgcggcgaggatgaggtgctggacaaggaccaagtcgacaacgacgaggac
atcgaggacatggacgccatcgacgctgatgacgatgccgatgacgacgatcagctcgat
gccgacagcgacgatgatgcggatgacgatagcgacgacgctggggacggcgatcacgac
gatgacggcgaggacgaggagaagcacgtcgaggagcctgtggttcccaaggccaaaggc
gtcttcgtggtgcgcgatgacgatgatgacgagaatctcacgccttcgggcaacccgaag
cgccgcgtggtcgctgctggtgccacggccgacccggtcaaggactacctcaagcagatc
ggccgcgtgagcctgctgaacgctgagcaggaggtcgacctttccgagcgcatcgaggcc
ggtctctacgcccagcatctgcttgacgccgaaagcgagggcatggagttccgccgcaag
cgcgagctgaaatgggcggcgaacgacggcaagaaggccaaggaccacctgcttgaggcg
aacctgcgactcgtggtctctctggccaagcgctacacgggccgcggcatgctcttcctc
gatctgattcaggaaggcaatctgggcctcatccgcgccgtcgagaagttcgactggaag
aagggcttcaagttctcgacctacgccacctggtggattcgccaggccatcacccgcgcc
atggccgatcaggcgcgcacgattcgcgtgcccgtgcacatggtcgaggtcatcaacaag
ctttcgcgcgtccagcgccagatgctgcaggatctcgggcgtgagcccacgccggacgag
ctggcccgagagctcgacatgccggtcgagaaagtgcaggaagtgcagaagtacggccgt
gagccgatttcgctgcacactccgctcggcgaggatggcgattccgagttcggcgatctg
atcgaggacaccgacgcgatcgcgccttcggacgccgtggccttctccctgctgcaggag
cagttcaagcaggtgctggaaaccctgtcgccccgcgaggcgggcgtcatcaagatgcgc
tacggccttgaggatggccagcccaagacgctcgatgatatcgggcgcgtctacggcgtg
acccgcgaacgcatccgccagatcgaatcgaagaccatgtcgaagctgcgtcacccttcg
cgttcgcagacgttgcgcgacttccttgaccagtga

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