Bifidobacterium subtile: BS3272_02650
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Entry
BS3272_02650 CDS
T07068
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bsue
Bifidobacterium subtile
Pathway
bsue02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BS3272_02650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsue03021
]
BS3272_02650
Transcription machinery [BR:
bsue03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BS3272_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DprA_WH
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QOL36877
LinkDB
All DBs
Position
596821..598236
Genome browser
AA seq
471 aa
AA seq
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MATKETTAIMEQADQATGSDPSKKAAPARKASAKKTKAASATTAKKTPAKSAAEPVRSGN
AHARGEDEVLDKDQVDNDEDIEDMDAIDADDDADDDDQLDADSDDDADDDSDDAGDGDHD
DDGEDEEKHVEEPVVPKAKGVFVVRDDDDDENLTPSGNPKRRVVAAGATADPVKDYLKQI
GRVSLLNAEQEVDLSERIEAGLYAQHLLDAESEGMEFRRKRELKWAANDGKKAKDHLLEA
NLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRA
MADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGR
EPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMR
YGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttggccacgaaggaaacgacggcgatcatggaacaggctgaccaggctaccggcagtgac
ccctcgaagaaggccgcgccggcgaggaaggcctcagcgaaaaaaacgaaggccgcctcc
gcaaccactgcgaagaagacgccggcaaaatcggcagctgaaccggtgcgctccggcaat
gctcatgctcgcggcgaggatgaggtgctggacaaggaccaagtcgacaacgacgaggac
atcgaggacatggacgccatcgacgctgatgacgatgccgatgacgacgatcagctcgat
gccgacagcgacgatgatgcggatgacgatagcgacgacgctggggacggcgatcacgac
gatgacggcgaggacgaggagaagcacgtcgaggagcctgtggttcccaaggccaaaggc
gtcttcgtggtgcgcgatgacgatgatgacgagaatctcacgccttcgggcaacccgaag
cgccgcgtggtcgctgctggtgccacggccgacccggtcaaggactacctcaagcagatc
ggccgcgtgagcctgctgaacgctgagcaggaggtcgacctttccgagcgcatcgaggcc
ggtctctacgcccagcatctgcttgacgccgaaagcgagggcatggagttccgccgcaag
cgcgagctgaaatgggcggcgaacgacggcaagaaggccaaggaccacctgcttgaggcg
aacctgcgactcgtggtctctctggccaagcgctacacgggccgcggcatgctcttcctc
gatctgattcaggaaggcaatctgggcctcatccgcgccgtcgagaagttcgactggaag
aagggcttcaagttctcgacctacgccacctggtggattcgccaggccatcacccgcgcc
atggccgatcaggcgcgcacgattcgcgtgcccgtgcacatggtcgaggtcatcaacaag
ctttcgcgcgtccagcgccagatgctgcaggatctcgggcgtgagcccacgccggacgag
ctggcccgagagctcgacatgccggtcgagaaagtgcaggaagtgcagaagtacggccgt
gagccgatttcgctgcacactccgctcggcgaggatggcgattccgagttcggcgatctg
atcgaggacaccgacgcgatcgcgccttcggacgccgtggccttctccctgctgcaggag
cagttcaagcaggtgctggaaaccctgtcgccccgcgaggcgggcgtcatcaagatgcgc
tacggccttgaggatggccagcccaagacgctcgatgatatcgggcgcgtctacggcgtg
acccgcgaacgcatccgccagatcgaatcgaagaccatgtcgaagctgcgtcacccttcg
cgttcgcagacgttgcgcgacttccttgaccagtga
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