KEGG   Bifidobacterium subtile: BS3272_02825
Entry
BS3272_02825      CDS       T07068                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
bsue  Bifidobacterium subtile
Brite
KEGG Orthology (KO) [BR:bsue00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bsue02048]
    BS3272_02825
Prokaryotic defense system [BR:bsue02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    BS3272_02825
SSDB
Motif
Pfam: Cas_Csd1 RsaX20
Other DBs
NCBI-ProteinID: QOL36908
LinkDB
Position
646529..648493
AA seq 654 aa
MSLWSSLLETYDEVQNVAGMILPDRDGNPDVSKVLLPLHHTTLKTQLCVTLDQNGVLRRI
EKDSKDVTIVVPCTEKSMGRSGTKPVPHPLCDQLQYVDKAYDADKFALYMRQLDSWKGEN
AKLNAIYRYLSEHSISADAQHFDLDLYNPDGVSDDSSEPKSNEQDAKSRFNKDRKLGVRF
SVEVPGDHTPHIWEDRAIRDLWIAHQSNTGEKIGVDDFGETLYEPADSFPKKIVSVDGNA
KLISANDNTNFTFRGRFSDKSEALRIDKLTSQKVHSTLSWIVSNNGDATDTQDIVIWAVG
GDPADVVKPEGDSSELFAQFHGSEERTESEQQTEARHQIDTDYAEKFAGILRGYGDAQIL
TKHGRKVVLAIFDAATSGRLSVTFYRELDSGKYLESILRWHIDSAWPLIRFTYDEKKKSK
PVEYIGAPSFDNIVKCAYAVDERSSASYKRFSKNVKKELIECMFGSHDLPSSLLRSAFHR
VTRPMGYSSTSAWSRNFEIACSLWKKHFVQERTIVTMELDVTRTDRDYLYGRLLALADDF
ESGVLYQQGILDTRPTNAVKLMSNFVAKPYSTWGNLWKQLVPYMKSANIKTLKRANRFQD
DVDDVMALFRDGDYDISDALSPLFLLGYSSQRRVLKQRIAAKKSTEAIEEIKGE
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgagcttatggtcgagtctacttgagacatatgatgaagtgcagaacgtcgctgggatg
attctgcctgatcgcgacggaaatcccgatgtgagcaaggtcctcctgccgctacatcac
actacgttgaagacgcagctctgcgtcacccttgatcagaatggtgttctaaggagaatt
gaaaaggactcgaaggatgtcaccattgttgtgccatgcactgagaaatccatgggtcgc
tccggcacgaaaccggtgcctcatccgttatgtgatcagttgcaatatgtcgataaagcg
tatgacgcggacaaatttgctttgtacatgcggcagctggacagctggaagggtgagaat
gcaaaactcaatgcaatttaccgttatctttccgagcatagcatttcggcagatgcacaa
cattttgatcttgacctttataatcctgatggcgtttcagatgattcttccgaaccgaaa
tcgaacgaacaagatgccaaaagtcggtttaacaaggaccgtaagctcggggtccgattc
tcagtggaagttccgggtgaccatactcctcatatttgggaagacagggcgatacgcgat
ctatggattgctcatcagagcaacacaggcgagaagatcggagttgacgattttggtgag
acgctttatgagcctgccgacagcttccccaaaaagatagtaagtgtcgatggcaatgcc
aaacttatttcagctaatgacaacactaatttcactttccgtggcaggttctccgataaa
agtgaagctttaagaatcgacaagctcacttctcagaaggttcattcgacgttgtcatgg
atcgtcagtaataatggcgatgctaccgatacccaggatatcgtgatttgggcagtggga
ggcgaccccgctgatgtggtaaagcccgagggggattctagcgagctgtttgcacaattc
cacgggtcagaggaacgtactgagtccgagcagcagactgaggcacggcatcagattgat
actgactatgcggagaaatttgcgggaattctgcgtggctacggtgatgcgcagatatta
acgaagcacggcagaaaagtcgtgcttgcgatttttgatgctgcgacctcaggcagactc
agcgtcacgttctatcgtgaactggacagcggcaaatacttggaaagtatcctgcgttgg
catattgactctgcttggccactcatacgatttacctatgatgagaaaaagaagtctaag
ccagttgaatatataggcgccccttcgtttgacaatatcgtgaaatgcgcttatgcggtt
gacgagcgttcgagtgccagttataagcgcttctcgaaaaacgtcaagaaggaactgatc
gaatgcatgttcggcagtcatgaccttcctagttctttgttgcggtcggcttttcatcgg
gtcacaaggccgatgggatatagcagcacatcagcatggtctcggaacttcgagattgca
tgcagcctttggaaaaaacacttcgtacaagaaaggacaatcgtaactatggaactggat
gtgacacggaccgatagagattatctctatggacgtctgctggcgcttgccgatgacttt
gaatccggggtgctgtatcagcaaggcattcttgacacgcggccgaccaatgcagtgaaa
ctcatgagtaacttcgtggccaaaccttattccacatggggcaacctgtggaagcagctt
gtgccgtatatgaaatcagctaacataaaaacgttgaaaagggcgaatcgttttcaagat
gatgtagatgatgtcatggcgcttttccgagatggggattacgacatcagcgatgcacta
tcgccgttattccttttgggatactcatctcagcgcagagttcttaaacagcgtatcgcg
gcgaagaaatctacagaagcaatcgaagaaattaaaggagaataa

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