Bifidobacterium subtile: BS3272_04380
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Entry
BS3272_04380 CDS
T07068
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bsue
Bifidobacterium subtile
Pathway
bsue03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS3272_04380 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsue03400
]
BS3272_04380 (uvrA)
DNA repair and recombination proteins [BR:
bsue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS3272_04380 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BS3272_04380 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_23
AAA_21
DnaJ_CXXCXGXG
APS_kinase
Cytochrome_C7
Cytochrom_c3_2
NACHT
AAA_24
Mtrc-MtrF_II-IV_dom
T2SSE
cobW
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QOL37535
LinkDB
All DBs
Position
1041520..1044519
Genome browser
AA seq
999 aa
AA seq
DB search
MASHSAAHSVTAQHDSVAEHVLDSETFLSRELAKAQLKGSNGSLVADISHIPSDLKITIQ
GAREHNLRNVDLAIPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQ
MDKPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGVPHCPVCGELV
SAQTPQQMVDAMLAYPDRTRFQILAPVVRGRKGEFEDLLELLRGDGYSRALIDGEMRQLS
DDIKLTKQKKHTIEVVVDRLVIKDGIRQRLTDSIETALKLAKGIVIVDFVDLDVKDPNRR
RPFSEKRACPNGHQLDLDEIEPRTFSFNAPYGACPECTGIGFNLEIDPELVIPDPDKTLN
EGAIEPWGMTKGTGEYYRHVLEGLGEEMGFSLDTSWKKLPEDVRHSIMYGHDFKVNVSYR
NRWGRMREYSTGFEGVVRTLMRRHDETDSDQMKQYYESYMREVPCQACHGKRLRPEVLAV
TVNDQSIADVCDMPVEHALAWVNELKLTGSAVKIAGEVLKEIRARLGFLNDVGLNYLTLS
RAAKTLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLISTLHHLRDLGNTL
IVVEHDQETIEKADWLVDIGPGAGEHGGEVIYSGPSKHLVEASRSVTGDYLAGRRSIAVS
AKRRKVRKTKQLKVVGARENNLQNLTVNFPVGVMTCVTGVSGSGKSTLVNSILYPVLADK
LNGARIVPGKHTRIEGVDQCDKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQ
VRGYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVECEECHGKRYNRETLEVTYNG
KTVADVLNMPIEEAAQFFKAYPSIARYLDTLVQVGLGYIRLGQPAPTLSGGESQRVKLAT
ELQRRSTGSTVYILDEPTTGLHFEDVRKLLLVLDGLVDKGNTVIVIEHNLDVVKSADWLI
DLGPEGGNGGGTIVAEGTPEQVAQCEESWTGRFLKPMLA
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
gtggcttctcattcggcagcgcacagcgtcacggcgcagcatgactcggttgcggaacat
gtcttggacagcgaaacgttcctctcaagggaactggcgaaggcgcagctgaaggggtcg
aatggttcgctggtagcggatatctcacacattcccagcgatttgaagatcaccatccaa
ggcgctcgcgagcacaacctgcgcaacgtcgatctcgcgattccgcgtaaccgcatggtc
gtgttcaccgggctgtccggctcgggcaagtcctcgctggcctttgacaccttgttcgcc
gaggggcagcgacgctatgtcgaatcgctgagcgcctacgctcgccagttcctcggccag
atggacaagcccgacgtggacttcatcgaggggctgagccccgccgtctccatcgaccag
aagaccacgaaccgcaatccgcgatccacggtcggcaccatcaccgagatctacgattat
ctccgcctgctgttcgcccgcacgggcgtcccgcactgcccggtgtgcggcgagctcgtc
agcgcccagacgccgcagcagatggtggacgccatgctcgcttatcctgatcgcacgcgc
ttccagatacttgcgccggtcgtgcgcgggcgcaagggcgagttcgaggatctgcttgaa
ctgctgcgcggcgacggctattcacgtgcgctgatcgacggcgagatgcgccagctctcc
gatgacatcaagctcaccaagcagaaaaagcacacgatcgaggtcgtcgtggatcgcttg
gtcatcaaggacggcatacggcagcggctcacggattccatagagaccgcgctcaaactg
gccaaaggcatcgtcatcgtcgatttcgtggatcttgacgtcaaggacccgaaccgtcgc
cggcccttctccgagaagcgcgcctgcccgaacggccaccagcttgacctcgatgagatc
gagccgcgcactttctcattcaacgcaccgtacggcgcatgcccggaatgcaccggtatc
ggcttcaacctcgaaatcgacccggagctggtgattcccgacccggacaaaaccctcaac
gaaggcgccatcgaaccgtggggcatgaccaagggcaccggcgaatactatcgccatgtg
cttgaaggcttgggcgaggagatgggcttcagccttgatacttcgtggaagaagctgccc
gaggacgtgcgccattccatcatgtacggccatgatttcaaagtcaatgtgtcctaccgt
aaccggtggggccgtatgcgcgagtattcgaccggcttcgaaggcgtggtgcgaaccttg
atgcgccggcatgacgagaccgattcggaccagatgaagcagtactacgaatcctatatg
cgcgaagtgccgtgccaggcctgccacggcaagcggctgcgccccgaggtgctggcggtc
acggtcaacgaccagtccatcgcggatgtctgcgatatgcccgtggagcatgctctcgca
tgggtcaacgagctgaagctgaccggttcggccgtgaagatcgccggcgaagtgctcaag
gagattcgcgcccgactgggcttcctcaacgatgttgggctgaactacctgaccctgtcg
cgcgccgccaaaaccctgtccggcggcgaagcgcagcgcattcgcctggccacgcagatc
ggctcggggctggtgggcgtcatgtacgtgctggacgagccgtcgattggactgcatcag
cgcgacaatgagcgactgatttccacgctgcaccatctgcgcgaccttggcaacacgctg
atcgtggtcgagcacgatcaggagaccatcgagaaggccgattggctggtcgatatcggg
ccgggagccggcgagcatgggggagaggtcatctactccgggccctcgaagcatctcgtc
gaagcctcgcgctcggtgacaggagactatctggccggtcggcgcagcatcgccgtgtcc
gcgaagcgccgcaaggtgcgcaagaccaagcagctcaaggtcgtgggcgcacgcgagaac
aatttgcagaacctgaccgtgaacttccccgtaggcgtcatgacctgcgtcaccggcgtc
tccggttcgggcaagtccacgctggtcaactcgattctctacccggtgctggccgacaag
ctcaacggcgcgcgcatcgtgccgggcaagcacacccgcatcgaaggcgtggaccagtgc
gacaaggtgattcacgtcgaccagaatcccatcggcagaacgccccgctctaacccggcg
acctacaccggcgtgtgggacaagattcgcacgctcttcgccaagacgccggaggctcag
gtgcgtggctacggccccggccgcttctcctttaacgtcaagggcgggcgctgcgaggcc
tgccacggcgacggcacgctcaagatcgaaatgaacttcctgccggacgtctacgtggaa
tgcgaggaatgccacggcaagcgctacaaccgcgagacgctcgaagtcacctacaacggc
aaaaccgtcgccgatgtgctcaacatgccgatcgaggaggccgcgcagttcttcaaggca
tatccctccatcgcccggtatctcgacaccttggtgcaggtgggactgggctatatccgc
ctcgggcagccggcgccgactctgtccggcggcgaatcgcagcgtgtcaagctggccacc
gagctgcagcgccgttcgacaggcagcaccgtctatattctggacgagccgaccaccggt
ctgcacttcgaggacgtgcgcaagctgctgctcgtgttggacggcctggtcgacaagggc
aacacggtgatcgtcatcgagcacaatctcgatgtcgtcaaatccgctgactggcttatc
gacctcggcccggaaggcggcaatggcggcggcaccatcgtggccgaaggcacgccggag
caggtcgcccaatgcgaggaaagctggacaggtcgtttcctcaagcccatgctggcatga
DBGET
integrated database retrieval system
