Bifidobacterium subtile: BS3272_07465
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Entry
BS3272_07465 CDS
T07068
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bsue
Bifidobacterium subtile
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsue03400
]
BS3272_07465 (vsr)
DNA repair and recombination proteins [BR:
bsue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BS3272_07465 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
DUF5014
Proteasom_PSMB
Motif
Other DBs
NCBI-ProteinID:
QOL37629
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All DBs
Position
complement(1733276..1733917)
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AA seq
213 aa
AA seq
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MDSVNEAEESIVQDEAPDSGEVLPSTAQREAIKAASPLEPASLPEPRSAKRRKKSKTSLK
KDRATKGVAEKYARGTRSYTMSHIHGKDTAIEVEVRRYLFARGLRFRKNDKRYPGHPDVV
LPKWHVIVFVNGCFWHAHEHCAKHTMPKSNVEYWSAKLLRNRERDHEQHAQLAAMGWRVI
DVWECELKKNVREERLERLYDEITEEATQLPAD
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgtgaatgaagctgaggaatccatcgtgcaggatgaggcgccagacagcggg
gaagtgctgccatcaactgcgcaacgtgaagcgataaaggcggcttcgccactggagccg
gccagcttgccagagcctaggtctgccaagcgtaggaagaagagcaagacaagtctcaag
aaggaccgcgcaacgaagggggttgccgagaaatacgcccggggcacgcgcagctacacg
atgtcgcatatccacggcaaggatacggccatcgaggtggaagtgcgccgttacctgttc
gcgcgaggattgcgtttccgcaaaaacgacaaacgctaccctggccatcccgacgtggtg
ctgccgaaatggcatgtgattgtcttcgtgaacgggtgcttctggcacgctcacgagcac
tgcgccaagcatacgatgcccaaatccaacgtggagtattggagcgccaagctgctgcgc
aaccgcgagcgtgaccacgagcagcatgcccagcttgcggcgatgggctggcgcgtgatt
gacgtctgggagtgcgagcttaagaaaaacgtacgcgaggaaaggctggagcggctgtac
gacgagataacggaagaagctactcagcttccagccgactga
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