KEGG   Bifidobacterium subtile: BS3272_08435
Entry
BS3272_08435      CDS       T07068                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
bsue  Bifidobacterium subtile
Brite
KEGG Orthology (KO) [BR:bsue00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsue03400]
    BS3272_08435 (radA)
DNA repair and recombination proteins [BR:bsue03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BS3272_08435 (radA)
SSDB
Motif
Pfam: AAA_25 Zn_ribbon_LapB ATPase DnaB_C Lon_C ChlI AAA_16 AAA_22 NACHT Rad51 SLFN-g3_helicase ABC_tran AAA DUF7125 TniB Isochorismatase AAA_24 AAA_14 RecA nSTAND3 AAA_19 nSTAND1 AAA_29
Other DBs
NCBI-ProteinID: QOL35920
LinkDB
Position
1978774..1980198
AA seq 474 aa
MAKSTTQYVCTECGWSGPKWYGRCPQCGQWGTIEEFHEARPAASTRTAAPGRTSRTLANH
SGDLGAMPITKVDTRNVQRIPTGFGEFDRVLGGGIVPGSVVLVAGEPGIGKSTLLLETAG
HVARYVAHGQSPRSVLYISGEESQAQVRMRASRIEAVEENLLLASTTDLSAALGLIEQEK
PALVIVDSAQTIVSQEVDGIAGGSTQVREVASALIDSAKTMDIPVFLVGHVTKDGSIAGP
RTLEHVVDVVCQFEGDAQTALRMLRAVKNRFGPTDEVGCFDMSGDGIEEVRDPSGLFLST
SDQPTEGTCVTFTLDGHRSLPIEVQALVTATALPSPRRATNGIDSNRLAMLIAVLYKHGH
VNLLAKDVYVSTIAGGLAKEPGCDLAIVSALASAATSRPIARTTCAIGEISLTGQVRPIP
RLAHRLAEAARLGFTTAIVPPMRQRANVAAPAGLHVVEVTSLRDALGALGVSTR
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggcgaaaagcacgacgcagtatgtatgcacagaatgcggctggagcggaccgaaatgg
tacggccgctgccctcagtgcggccaatggggcaccatcgaggaattccatgaggcccgg
cctgctgcctccacacgcacagcggcgccgggacgcacttcgcgaacgttggcgaatcat
tccggcgatcttggcgctatgcctatcaccaaggtcgacacccgcaatgtgcagcgcata
ccaaccggtttcggcgagttcgaccgggtgctcggcggcggcatcgtccccggttcggtc
gtgctggttgccggcgagccgggcatcggcaaatcgacgctgctgctggagaccgcgggg
catgtcgcgcgttacgtggcgcacggccaatcgcctagatcagtgctgtacatatccggc
gaggaatcgcaggcccaggtcaggatgcgggcttcgcgcatcgaggctgtcgaggagaac
ctgctgctggcctccaccaccgatctgtccgccgcgctcggcctgatcgagcaggagaag
ccggcattggtcatcgtcgattcggcgcagaccatcgtctcgcaggaagtcgacggcatc
gccggcggctccacgcaggtgcgcgaagtcgccagcgctttgatcgacagcgcgaagacc
atggatatcccggtgtttctggtgggccatgtgaccaaggacggctcgatcgccggcccg
cgcacgctggaacacgttgtggacgtcgtctgccagttcgagggcgacgcgcagaccgcg
ctgcgcatgctgcgcgccgtgaagaaccgcttcggaccgaccgatgaggtcggctgcttc
gatatgagcggcgacggcatcgaagaggtgcgcgacccttcggggctgttcctgtcgact
tcggatcagccgaccgaaggcacctgcgtcaccttcaccttggacgggcatcgcagcctg
cccatcgaagtgcaggcgctggtgaccgcgacggcgctgccctcgccccgtcgcgccact
aacggcatcgattcgaaccgcttggcgatgctcatcgccgtgctctataaacatggtcac
gtgaatcttctggccaaggacgtctacgtttcgaccatcgccggcgggctggcgaaggag
cccggctgcgacctggctatcgtttccgcgctggcgagcgccgccacgtcacgcccgatt
gcacgcaccacctgcgcaatcggcgaaatatcgctcaccggccaggtgcgcccgatcccc
cgtctcgcgcatcgcctggccgaggcggcacgactgggctttactacggcgatagtgccg
ccgatgcgccaacgcgccaacgtcgccgcgcctgccggactgcatgtggtcgaagtgact
tcgctgcgcgatgctttgggagccttgggcgtgtcgacacgataa

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