Bifidobacterium subtile: BS3272_08480
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Entry
BS3272_08480 CDS
T07068
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bsue
Bifidobacterium subtile
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsue03016
]
BS3272_08480 (truB)
Enzymes [BR:
bsue01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BS3272_08480 (truB)
Transfer RNA biogenesis [BR:
bsue03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BS3272_08480 (truB)
Prokaryotic type
BS3272_08480 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QOL35929
LinkDB
All DBs
Position
complement(1988859..1989965)
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AA seq
368 aa
AA seq
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MAPTSQLGSGLLVIDKPRGVTSHDVVAAVRSMLHIKRVGHAGTLDPMATGVLIVGFGHAT
RLLNVIVGHDKTYEATIRLGVATTTDDAEGEPIAADPLPDCESIDQATIEQVIRERFIGV
IDQVPSIYSAIKIDGKRAYDLARQGVDVELKARSITVSAFDVLDMRRVSSTTASPAPETA
FRARTAAAAEPETATAAPGTTTAPHGNLIDLDVRVTCSAGTYIRALGRDLGRELGVGGHL
TALRRTRIGDFDVTAPHVMPARAVARTYIGREGHEVTRNKAVFDCDADGLRSCAMPMLEA
AKAAMPSIAITEAQARDLRFGRRIEVHVRIDAPTAAYVQPSGEVIAILEPAGDADAGIAK
PVAVFPAD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggctccaacgtctcagctcggttccggcctcctcgtcatcgacaagccacggggcgtg
accagccatgacgtggtggctgcggtgcgttcgatgctgcacatcaagcgggtcggacac
gccggaacgcttgacccgatggccaccggcgtgctgatcgttggatttggccacgccacg
cggctgctcaatgtcatcgtggggcacgacaagacctacgaggcgacgattcggctgggc
gtggcgacgacgaccgacgacgccgaaggcgagccgattgcggctgatccgctgcctgat
tgcgagtcgatcgaccaagcaacgattgagcaggtcattcgggagcgtttcatcggtgtg
atcgaccaagtgccaagcatttactccgccatcaaaatcgacggcaaacgcgcctacgac
cttgctcggcaaggcgtggacgtcgaactgaaagcccggtcgattacggtcagcgccttc
gacgttcttgacatgcgacgagtgtccagcacgactgcgagtccagctcctgaaacagct
ttcagagcacggacggcggcagcggcggaaccggaaaccgcaacggcggcgccgggaacg
acaacagctccgcatggcaatctgatcgaccttgacgtgcgggtcacctgctcggcaggc
acctatatacgcgctcttggccgcgacctcgggcgcgaactcggcgtcggcgggcacctg
actgctttgcgccgcacccgcatcggcgatttcgatgtcactgcgccgcatgttatgcct
gcccgcgctgtcgccagaacctacatcggccgggaaggccacgaggtcacgcgcaacaag
gcagtattcgactgtgacgcggacggattgcgttcatgcgcgatgccgatgcttgaggcg
gcgaaggccgctatgccgagcatcgcgataaccgaggcgcaggctcgcgacctgcgcttc
ggcaggcgcatcgaggtgcacgtgcgcattgatgcgccgacggccgcatacgtgcagccc
agtggcgaggtgatcgcgattctcgagccggctggcgacgccgacgcaggcatcgccaag
ccggtggccgtcttccctgcggattga
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