Bifidobacterium subtile: BS3272_08995
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Entry
BS3272_08995 CDS
T07068
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bsue
Bifidobacterium subtile
Pathway
bsue03030
DNA replication
bsue03430
Mismatch repair
bsue03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BS3272_08995
03430 Mismatch repair
BS3272_08995
03440 Homologous recombination
BS3272_08995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsue03032
]
BS3272_08995
03400 DNA repair and recombination proteins [BR:
bsue03400
]
BS3272_08995
Enzymes [BR:
bsue01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BS3272_08995
DNA replication proteins [BR:
bsue03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BS3272_08995
DNA repair and recombination proteins [BR:
bsue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BS3272_08995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_22
zf-CXXC
AAA_14
DEAD
AAA_2
AAA_19
Rad17
Motif
Other DBs
NCBI-ProteinID:
QOL36016
LinkDB
All DBs
Position
complement(2111213..2114554)
Genome browser
AA seq
1113 aa
AA seq
DB search
MALALYRRYRPDTFDGVIGQTQVTVPLSRALDEGKLTHAYLFSGPRGCGKTSSARILARC
INCEKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERATFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPEKVIGTIRSRTHHYPFRLVP
TEIMGPYLQDICEKEHIGTEPGVLKLAMRSGGGSMRDTLSVLDQLMVGSVDGVITHDSAV
ALLGFTPDALIGEAIDAVIERDGEKLYGVVQKVVVGGFDPRRFVEDLLSRVRDLLVLTLG
GERAESVLGDDSAAEDMDHLHRQAAALGLGSLSAMAETINAALSAMAGAVSPRMRLELLA
ARLLAGRDPETAVMAAQQDSTANMAGIASGQSAGGAAQSASRGGFAGSNRRSAQRSSSGA
APATAPALADQVNNAPAAAGTAAEAQSADSANAMASNPGERSGSMPVAEAQPTSHTGRNA
PNGRNPVAAGDEAEAEAASFAQTPNTGLSTTGPSTANPSPSPALATPSAGPTAASANEAT
RNAPQHAAVADQTATAVQEDRRSVDERWDAAIAALPSDVREYVTRDKVVRVALASNRAGK
QRISMTFDCPLSQHAFALAVSSDEAHRGHKASKVVLAAVREVFGANTMIAPTPVAANGEQ
VEPTARMSGERLAQVKQQIALSKAGLAAAGLAVHVGAHMPTQPKEHRTGATDGQQNADDP
VHRGGREVPGEIDDRGNLGNQGESGTRGDHGSQNEPNNWERPDKQQQPGAQERPSNRSDS
AQESRNAAYGTPDDGIIHEPAHAGASADPWAQPAQEPDAASVAAFADTADAAIADPAAAA
HEQTAPQPPTEYDEDPWAVSPERRGPQKIQGDRKLQTQSSEQNARHDPAAVGGTEQSSAE
QGSASQTGADTAKPKEARHHKQVSVPDTSDGVDPWAMPSAPAANGSTSVMSRDASGDSAG
NQSRNPPGEAAGNLYDGADYAGEDSDRFAGNTTASAAGDSYDDSDPWAASQNSIQRNPIR
PNLTRPNLTSRNPMPAGAPTRSDAQEAPGREQVAPEEDEYSLNDESLGSATALDLDELAR
LFEVKSVEDFAADDPRNPKNIQPPNKSGKHQEG
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggcgttataccgcaggtacaggccggacacttttgacggggtgatcggccag
acgcaggtcacagtgccattgtcacgtgcgcttgacgaaggcaagctgacccatgcctat
ctgttctcggggccgcgcggatgcggcaagacgagttcggcccgtattcttgcgcgctgc
atcaactgcgagaaaggtccgacctcgcatccatgcggcgaatgcgagagctgcaaggac
ttggcgaccggagggccggggtcgatcgacgtcgtggagatcgacgcggccagccataac
ggcgtcgatgacgcgcgcgagctgcgtgaacgcgctaccttcgcccctgcccgcgatcgc
tataagatcttcatcctcgacgaggcccatatggtgacgcagcagggattcaacgccctg
ctcaaaatcgtggaggagccgccggagcatgtgatgttcatcttcgcgaccaccgagccg
gagaaagtgatcggcacgattcgctctcgcacccatcactatcccttccgcctcgttccg
actgaaatcatggggccgtacctgcaggatatctgcgagaaagagcacatcgggaccgaa
ccaggagtgctgaagctcgcgatgcggtccgggggcggctcgatgcgcgacaccctttcc
gtgctggatcagctgatggtcggctcggtggatggcgtcataacccacgattcggccgtc
gcgctgctgggctttacgccggatgcgctgatcggcgaggcaatcgacgccgtcatcgag
cgtgatggcgagaaactatacggggtagtacagaaggtcgtggtcggcggattcgatccg
cgtcgtttcgtggaggatctgctgtcccgcgtgcgcgatctgctcgtgctgactttgggt
ggcgaacgcgcggaaagcgtgcttggcgacgactccgcagccgaggatatggaccatctg
caccgccaggccgcggcgcttggtctcggctcactcagcgccatggccgaaaccattaac
gccgccttgagtgccatggccggcgccgtgtcgccgcgcatgcggctggaattgctggcg
gcgcggctgctggcaggccgcgaccccgaaaccgcggtcatggcggcgcagcaggactct
actgcgaatatggcaggcattgcgagcggtcagtctgcaggcggcgcagcgcaatcggcg
agccgaggcggttttgcaggttcgaaccggcgctcggcgcaacgttcgtctagtggcgcg
gctcccgcgaccgctcccgctctggctgaccaagtgaataacgctcctgccgctgcggga
acggctgctgaagcgcaatctgccgacagcgcgaatgcaatggcatcgaatcctggagag
cggtccggctcgatgccggttgccgaggcgcaacccacttcgcataccggccgtaacgcg
ccgaatgggcgcaaccctgttgcggctggcgatgaggctgaggctgaagccgcgtcgttt
gctcagacgccgaacaccggtctctccacgactggtccttcgacggccaatccttctcct
tccccggcgctggcaacgccgtccgccggcccgactgctgcttcggcgaatgaagcaacg
cggaatgcgccacagcatgccgccgttgccgaccagaccgcgacggcggtgcaggaggac
cgccgcagcgtcgatgagcgttgggacgccgccattgccgcgttgccgtccgatgttcgc
gaatacgtcacgcgggacaaggtcgtacgcgtcgcgctggcctcgaatcgtgcgggcaag
caacgcatatcgatgaccttcgactgcccgctgagccagcacgccttcgcgctggccgtt
tcctccgacgaagcgcatcgcgggcataaagcgtcgaaggtcgtgctcgcggctgtgcgt
gaggttttcggcgcgaacacgatgatcgcgccgacgccggtcgctgccaacggcgagcag
gtcgagccgaccgcgcgcatgagcggcgaacggctcgcccaggtcaagcagcagatcgct
ctgtccaaggccggtctggctgccgccggactcgccgtccatgtcggcgctcatatgccg
acgcagcccaaggagcaccggacgggcgccacggatgggcagcagaacgccgatgacccg
gttcatcggggcgggagggaagtcccgggcgaaatagacgacaggggaaatctcggcaat
cagggcgagtccggcacccgcggcgaccatggcagccagaacgagccaaataactgggaa
aggcccgacaagcagcagcaacccggagctcaggagcggcccagcaatcgaagcgattcc
gctcaagaatctcgcaacgcggcatacggcacgccagacgacggcatcattcacgagcct
gcccatgccggcgccagcgcagacccatgggcgcagccagcgcaggagccagacgccgca
tccgttgcggcatttgccgataccgcagacgcagccatagccgacccggcggccgctgcg
catgagcaaaccgctccgcagccgccgaccgagtacgacgaagacccttgggcggtttcg
cctgagaggcgagggccccagaaaattcaaggtgatcggaagctgcaaacgcagtcgtcc
gagcagaacgcgaggcatgaccccgctgccgtgggcggcacggagcagagtagcgcagaa
cagggcagcgcatctcagacaggtgcagataccgcgaaacccaaggaagcccggcatcac
aagcaggtttccgttcccgatacaagcgatggcgtcgacccttgggcgatgccatccgcc
ccggcggccaacggctcgaccagcgtcatgtcccgcgatgcgagcggggattcggcgggg
aatcagagcaggaacccacctggggaggcggccggaaacctgtatgacggcgccgattat
gccggggaggactccgatcgtttcgctggcaataccaccgccagtgccgctggcgattcc
tacgacgactccgatccatgggcggcgtcgcagaactccatacagcgcaaccccatacgg
cccaacctcacacggcccaacctcacgtcgcgcaatcccatgcccgcaggcgctccgacg
cgctccgacgcgcaagaggcgcccgggcgtgagcaggtcgctccggaagaggacgagtat
tcgctgaacgacgagtcgctcggctcggcgacggcgctggatttggacgagctcgcacga
cttttcgaggtgaaaagcgtcgaggactttgccgccgacgacccgcgcaacccgaagaac
atccaaccgcccaacaagtccggcaagcatcaggaaggctga
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