Bacillus subtilis subsp. subtilis JH642: BSUA_00042
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Entry
BSUA_00042 CDS
T03443
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bsul
Bacillus subtilis subsp. subtilis JH642
Pathway
bsul03030
DNA replication
bsul03430
Mismatch repair
bsul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSUA_00042 (holB)
03430 Mismatch repair
BSUA_00042 (holB)
03440 Homologous recombination
BSUA_00042 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsul03032
]
BSUA_00042 (holB)
03400 DNA repair and recombination proteins [BR:
bsul03400
]
BSUA_00042 (holB)
Enzymes [BR:
bsul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSUA_00042 (holB)
DNA replication proteins [BR:
bsul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSUA_00042 (holB)
DNA repair and recombination proteins [BR:
bsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSUA_00042 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
AIC38406
LinkDB
All DBs
Position
40665..41654
Genome browser
AA seq
329 aa
AA seq
DB search
MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEGGA
EPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQIQALQEEFSKTGLESHKKLYIISHAD
QMTANAANSLLKFLEEPNKDTMAVLITEQPQRLLDTIISRCQTLPFQPLQPKAIEDRLIE
QDVSPHMARLLANMTNNVAEAVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWM
PFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQIL
AVLEAKKRLHSNVNVQGLMEHLVLMLQEG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatcctggaaggaaatgaacgagcttcagcccagagtgatgaagcttttatat
aatagtattgagaaggacagactatcacacgcttatttgtttgaggggaaaaaaggaaca
ggcaagcttgatgccgcgctgcttcttgcaaaaagcttcttttgtctggagggtggcgcg
gagccttgtgagagctgccgaaactgtaaacggatagagtcagggaaccatcctgatctc
catcttgttcagcctgatggcttatcaatcaaaaaggcgcaaattcaagcgctccaagaa
gagttttctaagacaggacttgaatcgcataaaaagctgtatattatttcgcacgcagat
caaatgacagcaaatgcggcgaacagcctgctgaaatttttagaagaaccgaacaaagac
acaatggccgtcctcatcactgagcagccccaaaggttattggataccatcatttcaaga
tgccaaacccttccttttcagcctttgcagccgaaagcaattgaagacagactgatcgaa
caggacgtctcgcctcatatggcaaggcttctggccaacatgactaataatgtagcagaa
gcagtcgaattaagtcgaaatgatgagtttgcagagtctagagcgaaagtgataaaattg
tatgaagtcctacaccagcggaaaggacatgcttttttctttattcaagatcaatggatg
ccctttttcaaagaaaaaacccatcaagaaatgggtcttgatatgctcttattgatatat
cgtgatgtgttgtccatccaaataggaaatgaagataaattgatttatcaagacttattc
caatcaataaaacagcatgcgctacaatcaacacaacaaagcgttacgaatcagatactt
gctgttttagaagcaaagaaacggcttcattccaatgtgaatgtacaaggattaatggag
cacttggtgttaatgttgcaggagggataa
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