Bacillus subtilis subsp. subtilis JH642: BSUA_00592
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Entry
BSUA_00592 CDS
T03443
Symbol
ydfD
Name
(GenBank) PLP-dependent transcriptional regulator
KO
K18907
GntR family transcriptional regulator, regulator for abcA and norABC
Organism
bsul
Bacillus subtilis subsp. subtilis JH642
Module
bsul_M00700
Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:
bsul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsul03000
]
BSUA_00592 (ydfD)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bsul01504
]
BSUA_00592 (ydfD)
Transcription factors [BR:
bsul03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BSUA_00592 (ydfD)
Antimicrobial resistance genes [BR:
bsul01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
BSUA_00592 (ydfD)
Multidrug resistance, efflux pump NorB [MD:
M00702
]
BSUA_00592 (ydfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_36
HTH_Crp_2
HTH_11
HTH_41
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIC38912
LinkDB
All DBs
Position
567136..568584
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AA seq
482 aa
AA seq
DB search
MSFPEEKKMKKLPKYRQIVHFIKEKIGNGEWPIGSKIPSQRTLAKDFQVNRSTVITALEE
LMADGLIEGTMGKGTVVINNTWTLMAKNSAPDWDQYVTSGIQMPSRKIVQEINQSESNTD
LIQLSKGELSAEIFPLAVMKEMMGKVSQHMEAFGYEEPKGYLPLREALSNYLKTIGINVS
SSSILIVSGALQALQLISMGLLQRGSTVYLDQPSYLYSLHVFQSAGMKLTGLPMDNEGLL
PENVHLTRGERGRAILYTNPCFHNPTGILMSKKRREEILAVSENTQLPIIEDDIYRELWI
DEIPPYPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSL
SQRVAAEWFTSGHYQQHVEKVRQQLKVRRELALSALETHLKEVATWNIPKGGFFVWIKIL
PSISMKLLYTKALSKGILINLGSIYAQEKGNYIRLSYAYASLEDLQKGIYELGLMIKELA
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagctttccagaagaaaaaaagatgaaaaagctccctaagtacagacaaatcgttcat
tttattaaagagaaaataggaaatggagagtggccgattggaagcaagattccaagccag
cgcacgcttgcaaaagattttcaggtaaatcggagcacagtgattacagcgttagaggaa
ttgatggccgatgggctaatagaaggcacaatggggaaaggcacagttgttatcaacaac
acatggacactgatggctaagaattctgctcccgattgggatcaatatgtcacctctggc
attcagatgccaagccgaaaaatcgttcaagagataaatcaatcagaatcaaatacagac
cttatacagctcagtaaaggtgaactttcagctgagatttttcctttggctgttatgaaa
gagatgatggggaaggtatctcaacacatggaggcattcggatatgaagaaccaaaaggt
tacttacctttgagggaggcattaagcaactatttaaaaaccattggaatcaacgtctca
tcttcttccattctgattgtctcaggagcgttgcaagccttgcagctgatatcaatgggg
ctgttacaaagaggatcaaccgtttatcttgatcagccctcctacctttattcattacac
gtatttcaatcagctggtatgaagctgactggacttcctatggataatgaaggacttttg
cctgaaaatgttcatttaacaagaggagagcggggaagggctatcttatatacaaatcca
tgttttcacaatccgactggtattcttatgtctaaaaagcgacgggaagaaatcctagca
gtaagtgagaatacacagcttcctattattgaagatgacatttatcgtgagttatggatc
gatgaaattccgccatatcctattaaaacaattgataaaaatggacacgtactgtacata
ggaagtttatcgaaaacattaagcccaggtttgaggattggatggatcgtcggaccggaa
ccggtgattgaacgtttatctgacattaaaatgcaaacagattacggatccagttcgcta
tcccagagagtagcggcagagtggtttacttccggccactaccagcagcatgtagaaaag
gttaggcagcaattaaaggtgagaagagaattggccttgagtgctttagaaactcatttg
aaagaagtggcgacatggaatatcccaaaaggagggttttttgtctggataaaaatattg
ccttccatatcaatgaaattactttatactaaagccttatcaaaagggattctgatcaat
ctcggcagtatctatgctcaggaaaaagggaattatattcgcttatcatatgcttatgca
tctcttgaagaccttcaaaaggggatttatgagttgggtttaatgattaaagaattggca
agcaggtaa
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