Bacillus subtilis subsp. subtilis JH642: BSUA_01801
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Entry
BSUA_01801 CDS
T03443
Symbol
pnpA
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bsul
Bacillus subtilis subsp. subtilis JH642
Pathway
bsul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSUA_01801 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsul03019
]
BSUA_01801 (pnpA)
03016 Transfer RNA biogenesis [BR:
bsul03016
]
BSUA_01801 (pnpA)
Enzymes [BR:
bsul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BSUA_01801 (pnpA)
Messenger RNA biogenesis [BR:
bsul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSUA_01801 (pnpA)
Transfer RNA biogenesis [BR:
bsul03016
]
Prokaryotic type
tRNA degradation factors
BSUA_01801 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AIC40087
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All DBs
Position
1722934..1725051
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AA seq
705 aa
AA seq
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MGQEKHVFTIDWAGRTLTVETGQLAKQANGAVMIRYGDTAVLSTATASKEPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFADGFRNEVQVISIVMSV
DQNCSSEMAAMFGSSLALSVSDIPFEGPIAGVTVGRIDDQFIINPTVDQLEKSDINLVVA
GTKDAINMVEAGADEVPEEIMLEAIMFGHEEIKRLIAFQEEIVAAVGKEKSEIKLFEIDE
ELNEKVKALAEEDLLKAIQVHEKHAREDAINEVKNAVVAKFEDEEHDEDTIKQVKQILSK
LVKNEVRRLITEEKVRPDGRGVDQIRPLSSEVGLLPRTHGSGLFTRGQTQALSVCTLGAL
GDVQILDGLGVEESKRFMHHYNFPQFSVGETGPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEHYTVLT
DIQGMEDALGDMDFKVAGTEKGVTALQMDIKIEGLSREILEEALQQAKKGRMEILNSMLA
TLSESRKELSRYAPKILTMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTIFISS
TDESGNQKAKKIIEDLVREVEVGQLYLGKVKRIEKFGAFVEIFSGKDGLVHISELALERV
GKVEDVVKIGDEILVKVTEIDKQGRVNLSRKAVLREEKEKEEQQS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagaaaaacatgtctttaccatagattgggccggaagaacgcttaccgttgaa
accggccagcttgccaaacaggcaaatggtgctgtgatgatccgctacggtgatacagca
gtacttagtacagcaaccgcttcaaaagaacctaaaccgcttgatttcttccctcttact
gtaaactatgaagaaagattatatgcggtagggaaaattccgggcggatttattaaaaga
gaaggacgtccaagtgaaaaagcggttcttgccagccgtttaattgaccgtccgatccgt
cctttgtttgccgatggattccgtaatgaagttcaagtcatcagcattgtcatgagtgtt
gaccaaaactgctcttcagaaatggctgccatgttcggttcatctcttgcactttctgta
tcggatattccgtttgaaggaccgattgcaggggttactgtcggacgcattgatgatcaa
tttatcattaacccgacagtcgatcagcttgaaaaaagcgatatcaatcttgtcgttgcc
ggcacgaaagatgcgattaacatggtagaagcgggagcggacgaagttcctgaggaaatc
atgcttgaggccattatgttcggccatgaagagattaaacgcctgattgcattccaagaa
gaaattgttgcagcagtcggcaaagagaaatctgaaattaagctctttgaaattgatgaa
gagcttaatgaaaaagtaaaagctttggcagaagaggatctgctgaaagccatccaagtt
catgaaaagcatgcccgtgaagatgccattaacgaagtgaagaacgcagttgtggcaaaa
ttcgaggatgaagaacatgatgaagacacaatcaagcaagtgaagcagattttatccaag
cttgtgaaaaatgaagttcgccgcctgattactgaagagaaagtaagaccggacggccgc
ggtgtcgatcaaatccgtccgctctcttcagaggttggcctcttgccaagaacgcacggt
tcaggtctatttacaaggggacaaactcaggccctcagcgtatgtacgctaggtgctctg
ggagatgtgcaaatccttgacggcttaggtgtcgaagagtcgaaacggtttatgcatcat
tacaacttcccgcaattcagcgttggggaaacaggaccgatgcgcggaccgggacgtcgt
gaaatcggacacggagcactgggtgagcgtgcgcttgagccagttattccgtctgaaaaa
gacttcccttatactgtccgtcttgtttcagaagtgcttgaatcaaacggttctacatct
caagcaagcatttgcgcaagcacacttgcaatgatggatgccggtgtaccgattaaagcg
ccagttgctggtattgcgatgggtcttgtcaaatcaggcgaacattacactgtcttgact
gacatccaaggcatggaagacgcgctcggagatatggactttaaagtagcgggaactgaa
aaaggcgtaacggccctgcaaatggacattaaaattgaaggcctttccagagagattctt
gaagaagcgcttcagcaggcgaaaaagggcagaatggaaatcctcaacagcatgcttgca
acattaagcgaatcaagaaaagagctttctcgatatgcgcctaagatcttaacaatgacc
attaatcctgataaaatccgcgatgtcatcggaccaagcgggaaacaaatcaataagatc
atcgaagaaaccggtgttaaaattgatattgagcaggacggcacaatctttatttcctct
acagatgaaagcggcaaccaaaaagcgaaaaaaatcatcgaagaccttgtgagagaggtt
gaagtcggccaactttacctaggtaaagtgaaacggattgaaaaattcggggctttcgtt
gaaattttcagcggaaaagacggtttggtgcacatttcagagcttgcgcttgaacgcgta
gggaaagttgaagatgttgtgaaaatcggagacgagattcttgtcaaagtcactgaaatt
gataaacaaggacgagtgaatttatcccgcaaagcggtgctccgtgaagagaaagaaaaa
gaagaacaacaatcttaa
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