Bacillus subtilis subsp. subtilis JH642: BSUA_02191
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Entry
BSUA_02191 CDS
T03443
Symbol
yorL
Name
(GenBank) DNA polymerase; phage SPbeta
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsul
Bacillus subtilis subsp. subtilis JH642
Pathway
bsul03030
DNA replication
bsul03430
Mismatch repair
bsul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSUA_02191 (yorL)
03430 Mismatch repair
BSUA_02191 (yorL)
03440 Homologous recombination
BSUA_02191 (yorL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsul03032
]
BSUA_02191 (yorL)
03400 DNA repair and recombination proteins [BR:
bsul03400
]
BSUA_02191 (yorL)
Enzymes [BR:
bsul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSUA_02191 (yorL)
DNA replication proteins [BR:
bsul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSUA_02191 (yorL)
DNA repair and recombination proteins [BR:
bsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSUA_02191 (yorL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AIC40471
LinkDB
All DBs
Position
complement(2148364..2152281)
Genome browser
AA seq
1305 aa
AA seq
DB search
MIGCHCHTDRSNIRLLDSTNSVKELLKTAVKMEYKGLAITDHEVLSAHLDAIRTVREMKK
KGDMPEDFKLILGNEAYLVDSLEEVRDNYKSGVTKFPHFLMLAMDPKGHEQLRILSSQAW
ENSFYTGTMERVPTVKKDVEELLSKDPGHIIATTACLGSEVNIHLLKIKAFEETGDSQSI
KQHKLKIHEFITWCIEVFGKDKFFIELQPALSEEQIYCNKKLIDIANGYDLQMIVTTDAH
YLRPEDRAIHQAFLNAKDGEREVDSFYEACFVQNVDEIHERMDYIDKEVIDQAIKNTMLI
GEMIEDYTIEHEPIIPKMELPNFKLRHLFKPAYDQYEYIKKMSESADEQDRYLLKLIEDG
FEEKLKTSELTREAFHKILNRINVELGELWEISQKLNQSMSSYYITVREIINIIWDDECG
GDSLVGAARGSAAGYLVNYLLDNTQINPMQYDLPHWRHIHKSRPDLPDIDIDTEGSKRQK
ILKALRERFGDKRVLQIATFGTEGSKSALQTACRGLGIDNDISQYLSGMIPFERGSNWPL
KHCFYGDKETGRKPIKEFIREVEQYPNLKETALKIEGLTNKRSSHAAGVIIFNDEYTKSN
AMMKTPKGAYITQFNMGDSEAMGSVKFDLLTIEALDKIRVTLDQLIENNEIEWQGSLKET
YNKYIHPDVIEYEDDKLWEMAGNGEIMDLFQFSTEVGHQSVVKVKPKNLLEAAVTNSLMR
LMSDGEEQPVDTYVKYKNNLNKWYEEMTRYGLSEKEIRVMERHLKDIYGVADTQEVVMQM
VMDKDIANFDIKESNYLRKSIAKKKEDVLKEVEELFFKKGKEIGTSDNLLNYVWNVQFKR
QFGYSFSLLHTLAYSIIALQELNLNYRYNPLYWNTACLTVNSGGIDTEDTKDNKKTAATN
YGKVASAIGNIRQRGIKIDLPDINKADFGFRTDINNNSILFGLKGMNGIGDDVIHHIVLN
RPYSDFNDFIERMFKSGIIKKGQVIQLIKGGCFDSFGNRQEIMKAFISLISEPKSKLTLS
NLKMLIENNIVPSEFAQEVRFFRFKDYISKKVYKTLKSPKDKLFLLDDVSASFYNQHFSE
DSVVDMLNGQLVISEKAFKKEYDNKMSNIKSWITTEEPLKKLNDCLLIKEWEKYADGSLG
KWEMDSLSYYYNDHELSGVNFAKYDIADFYKLPAEPVKGKPYQWRGKTLYEYETTRIIGT
VLDRDKNKHAITLLTPTGVVTVKQWSGSFSHYNKQISRSIGGGKKEVIEKSWYTRGTLLM
FTGFRRGNNFIPKVYKDSIYNHTVCRIDFVDNEGSMSLTTKRAEI
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
ttgataggatgtcactgtcacacagataggagtaacataaggcttctagactcaacaaac
tcagttaaagaactgctcaaaactgcagtaaagatggaatataagggattggccataaca
gaccatgaagtcctctcagcacatttagatgctattcgaacagttagagaaatgaaaaag
aagggggatatgccagaagattttaaactgatattgggcaatgaagcgtacctagtcgat
tctttagaggaagttcgagataactataaatcgggagtgacaaaatttccgcatttcttg
atgttggcaatggatccaaaaggacatgagcagttaagaatactgtcttctcaagcctgg
gaaaactcattttatacaggaacaatggaaagagtgccgacagtaaaaaaggatgtagag
gagctattaagtaaagatccaggccacatcattgctaccacagcttgcttggggtctgag
gtaaacattcacctgttaaagataaaggcttttgaagaaactggtgattctcagtcaatt
aagcagcacaaactaaagattcatgagtttataacttggtgtatagaggtttttgggaag
gataagttttttatcgagcttcaacctgcactgagtgaagaacagatttactgtaacaag
aagctgatagatatagccaacgggtatgacttgcaaatgattgttacaacagatgctcac
tatctaagaccagaagatagagcaattcatcaagcctttttaaacgctaaggatggagaa
agagaagttgattccttttatgaagcctgtttcgttcaaaacgttgatgaaattcacgag
agaatggactacattgataaagaagtcatcgatcaggccataaaaaatacaatgctcatt
ggtgagatgattgaagactatactatagagcacgaaccaattatccctaagatggagctt
cctaactttaaattaagacatttatttaaaccagcatatgatcaatatgaatatataaaa
aagatgtctgaatcagcagatgaacaagatagatatctccttaagttaattgaggacgga
tttgaagagaaattaaaaacaagcgaactaacgagagaagcttttcataaaatattgaac
aggattaacgttgaactgggtgaactttgggaaatcagccaaaagctgaatcagtctatg
tcttcttattacataacagttagagaaatcattaatattatttgggatgatgagtgtgga
ggagatagtttagttggggcagccaggggaagtgctgcaggttacttagttaattatcta
ctcgacaatactcaaattaatccaatgcaatatgatttaccacattggagacatatacat
aaatcgagacctgacctaccagatatcgatattgatactgaaggatcaaaaagacaaaaa
attcttaaggcactaagagaaaggtttggagacaagcgtgttcttcaaattgctactttt
ggaactgagggttcaaaatcagcgcttcagacagcatgtagaggcttaggaatcgataat
gatatatcccagtatttaagtggaatgattccatttgaaagaggatctaactggcctttg
aagcattgtttttatggtgacaaagaaactggcaggaagccaattaaagagtttattagg
gaggttgaacaataccctaatcttaaagaaacagctttaaaaattgaagggttaactaat
aagcgctcttctcatgcagccggagtaattatctttaacgatgaatatacaaagtcgaat
gcaatgatgaaaactcctaaaggagcttatattacacagtttaatatgggtgacagtgaa
gccatgggctcagtaaagtttgaccttcttacaattgaagctttagataagattagagta
acattagaccaattaatcgagaataatgaaattgaatggcaaggaagcttgaaggaaaca
tacaacaaatacatccatccagacgtaattgagtatgaagatgataagctatgggaaatg
gctggtaatggggaaatcatggatttattccagttctcaactgaagtcggtcatcaatca
gttgtcaaagtaaaacctaagaacttacttgaagcagcagtaaccaattctttaatgagg
cttatgtcagacggtgaagaacagcctgtagatacatatgttaaatacaaaaataacctt
aataaatggtatgaagaaatgacacggtacggtctaagcgaaaaggaaatcagagtaatg
gagaggcaccttaaggacatttatggtgttgctgatactcaagaagtggttatgcagatg
gttatggataaagatatagctaactttgacattaaagaatcaaattatcttaggaaatcc
atagcaaaaaagaaagaagatgtactaaaagaagtggaagaattgttttttaaaaaagga
aaggagattggcacttctgataacctgttgaattatgtctggaatgttcaatttaaaaga
cagtttggctacagttttagtttacttcataccttggcatattcaattattgcattacag
gaattgaacttaaactatcgatataatcctttatactggaatactgcttgtttaacggta
aacagcggaggaatagataccgaggatacaaaagacaacaaaaagacagctgctacaaac
tacggaaaagttgcttcagccatcggaaacattagacaaagagggattaaaatagacctc
ccagatataaataaggctgattttggttttaggactgatattaacaacaattcaatttta
tttggacttaaaggaatgaatggaattggagacgatgttattcatcatatagttctaaat
agaccatatagtgactttaacgactttattgaaagaatgtttaagagcggcattattaag
aaaggacaagtaatccaattaataaaaggaggctgctttgattcttttggaaacaggcaa
gaaatcatgaaggcctttattagcttaatatcagaaccaaaaagtaagcttacgttgtct
aatttaaaaatgctaattgaaaacaacattgttccttcagaatttgcacaagaagtgaga
ttctttcgttttaaagattacatcagcaaaaaggtgtacaaaacattaaagtcgccaaaa
gataaactttttttattggacgatgtatcagcttcgttttataaccagcatttcagtgag
gatagtgtagttgacatgttaaacgggcagcttgtcatttctgaaaaagcttttaaaaaa
gaatatgataacaagatgtctaatataaagtcctggataacaacagaagaaccactgaag
aaattgaatgattgtttattaataaaagagtgggaaaaatacgccgatgggtcattagga
aagtgggaaatggattcattgagctattattataatgaccatgagctttctggtgtaaac
tttgccaagtatgatattgctgacttttataaactgccagcagagccggtcaaaggtaaa
ccttatcaatggagagggaaaactctctatgaatatgagactacacggattataggcact
gttttagatagggataaaaacaaacatgcaattactcttctaacacctacaggggtggtt
acagttaaacagtggtcgggcagctttagtcattacaataaacagatttctagatcaatt
ggtggcggaaagaaagaggtaatcgagaaatcttggtataccagaggaacattgctcatg
tttactggtttcagaagaggtaacaattttattccgaaggtctataaagatagcatatat
aatcacacagtctgcagaatagattttgttgataatgaaggaagtatgagtttgacaact
aaaagggcagaaatataa
DBGET
integrated database retrieval system
