Bacillus subtilis subsp. subtilis JH642: BSUA_04342
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Entry
BSUA_04342 CDS
T03443
Symbol
exoAA
Name
(GenBank) apurinic/apyrimidinic endonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bsul
Bacillus subtilis subsp. subtilis JH642
Pathway
bsul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSUA_04342 (exoAA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsul03400
]
BSUA_04342 (exoAA)
Enzymes [BR:
bsul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BSUA_04342 (exoAA)
DNA repair and recombination proteins [BR:
bsul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BSUA_04342 (exoAA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AIC42583
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All DBs
Position
complement(4170543..4171301)
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AA seq
252 aa
AA seq
DB search
MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQPEDYHVYWNYAVK
KGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDYR
MQWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQEREAFTRFLE
AGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDASISADVMG
SDHCPVELIINI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgatttcatggaatgtaaacggcctgcgggctgtgatgagaaaaatggatttc
ctctcttatttgaaagaagaggatgcagatattatatgtcttcaggaaacgaagatacag
gacggccaggttgatctccagcctgaagactatcatgtgtactggaattatgcagtgaaa
aaaggatattccggcacagctgttttttctaagcaagaaccgctgcaggtcatctacggt
atcggagtagaagagcatgaccaagaaggcagagtgattacgctggaatttgaaaacgtg
tttgtgatgactgtttacacgcccaattccagaaggggattagagcggattgattaccgc
atgcaatgggaagaggctttactgtcttatattcttgaattggatcagaaaaaaccagtg
attttatgcggtgatttgaatgtagcccatcaggagattgacttgaaaaatccaaaggcg
aaccggaataacgctggattttcagatcaagaaagagaggcattcactcgtttcttagaa
gctggctttgttgattcttttcgtcatgtttatcctgatcttgaaggcgcttattcctgg
tggtcgtatcgtgccggcgcccgggacagaaatattggatggcggattgattattttgtt
gtttctgaaagccttaaggaacagattgaagatgccagcatatcagcggacgtcatgggt
tccgaccattgtcctgttgaacttatcatcaatatatga
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