Basfia succiniciproducens: A4G13_00350
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Entry
A4G13_00350 CDS
T06488
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bsun
Basfia succiniciproducens
Pathway
bsun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G13_00350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsun03019
]
A4G13_00350
03016 Transfer RNA biogenesis [BR:
bsun03016
]
A4G13_00350
Enzymes [BR:
bsun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4G13_00350
Messenger RNA biogenesis [BR:
bsun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4G13_00350
Transfer RNA biogenesis [BR:
bsun03016
]
Prokaryotic type
tRNA degradation factors
A4G13_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
S1_2
aRib
KH_SLS1_2
KH-I_KHDC4-BBP
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QIM67953
LinkDB
All DBs
Position
61278..63392
Genome browser
AA seq
704 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVSVVAKKDVKEGQDFFPLTV
DYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFLNEIQIIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTMAEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLSAVVFGHQQQQVVVEAIKEFVAEAGKPRWDWVAPEPDSA
LISKVKAIAENRLGDAYRITEKQVRYEQIDAIKADVIAQITAEDEEVSEGKIVDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQSLAVVTLGTERD
AQILDELTGERQDTFLFHYNFPPYSVGETGRVGSPKRREIGHGRLAKRGVAAVMPSISEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPVKSAVAGIAMGLVKEDDKFVVLSDI
LGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMQIALNQAKSARMHILGVMEQAI
SAPRAEISEFAPRIYTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAAVD
GNAVKTVMARIEDIIAEVEAGSVYTGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEK
VSDYLQVGQEVQVKVVEIDRQGRIRLTMRDLGSKEESQEQSVEQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgtaaaacaatttaaatacggtcaacacaccgtaacattggaaaccgga
gctattgcccgtcaggcaacggcagccgtaatggcaagtatggacgatactacggtattt
gtttccgtggtggcaaaaaaagatgtaaaagaaggtcaggatttcttcccgttaaccgta
gattatcaagaacgtacttatgcggcaggtaaaatcccgggtggtttctttaaacgtgaa
ggtcgtccttccgaaggcgaaacgttaatcgcgcgtttaatcgaccgtccgattcgtccg
ttgttccctgaaggtttcttaaacgaaattcaaatcattgcgacagtagtgtctgtcaat
ccgcagatcagtcctgatttagtggcgatgatcggcgcttcagcggcactttcattatcc
ggcgtgcctttcaacggtcctatcggtgcggcacgtgtcggtttcattaacgatcaattc
gtgttaaacccaaccatggcggaacaaaaacaaagccgtttggatttagtggttgcgggt
acggacaaagctgtgttaatggtggaatccgaagcggatattttaactgaagagcaaatg
ttgtctgcggtggtgttcggtcatcaacagcaacaggttgtggttgaagccattaaagaa
tttgtggcggaagcgggtaaaccgcgctgggactgggttgctccggaaccggattcagca
ttaatcagcaaagtgaaagcaatcgccgaaaaccgtttgggtgacgcataccgtatcact
gaaaaacaagtgcgttacgaacaaatcgacgccattaaagcggatgtgattgcacaaatc
acagcggaagatgaagaagttagcgaaggcaaaatcgttgatattttcaccgcacttgaa
agccaaatcgtgcgcggacgtatcattgccggcgaaccgcgtatcgacggtcgtaccgtt
gacacggtgcgcgccttagacatttgcaccggcgtgttgccgcgcacccacggttcggca
atttttacccgtggtgaaacccaatcattagcggtggttaccttaggtacggaacgcgat
gcgcaaattcttgatgaattaacgggcgaacgccaggatactttcttattccactacaat
ttccctccgtattctgtaggtgaaacgggtcgtgtcggttcgccgaaacgtcgtgagatc
ggtcacggtcgtttagctaaacgtggtgtggctgctgtaatgccaagcatcagcgaattc
ccgtatgtggttcgcgtagtgtctgaaatcaccgaatcaaacggttcttcatcaatggcg
tctgtttgcggcgcatcattggcgttgatggatgccggtgtgccggttaaatccgccgta
gcgggtatcgccatgggcttggtgaaagaagacgataaatttgtggtgctttccgacatt
ttaggtgacgaagaccatttaggcgatatggacttcaaagtagcgggtacccgtaccggt
gtgactgcacttcaaatggatattaaaatcgaaggtattacgccggaaattatgcaaatt
gctttgaaccaggcgaaaagtgcgcgtatgcacattttaggtgtaatggaacaagcgatt
tcggcgccacgtgcggaaatttccgaattcgcaccgcgtatttacaccatgaaaatcgat
ccgaagaaaatcaaagacgtgattggtaaaggtggtgcgacaattcgtgcgttaaccgaa
gaaaccggtacctctatcgatattgatgatgacggtacggtgaaaatcgccgctgttgac
ggcaatgcggtgaaaaccgtgatggcgcggattgaagacattatcgccgaagtggaagcg
ggctcggtttacaccggtaaagtgacccgtcttgcggatttcggcgctttcgtggctatc
gttggcaacaaagaaggattagttcatatttctcaaattgcggaagaacgcgttgagaaa
gtaagtgattatcttcaagtcggtcaagaagttcaggttaaagtggtggaaatcgatcgt
cagggtcgtatccgtttaactatgagagaccttggttcaaaagaagaatctcaagaacaa
tctgttgaacaatag
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