Basfia succiniciproducens: A4G13_00360
Help
Entry
A4G13_00360 CDS
T06488
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsun
Basfia succiniciproducens
Pathway
bsun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G13_00360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsun03019
]
A4G13_00360
03009 Ribosome biogenesis [BR:
bsun03009
]
A4G13_00360
Enzymes [BR:
bsun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4G13_00360
Messenger RNA biogenesis [BR:
bsun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4G13_00360
Ribosome biogenesis [BR:
bsun03009
]
Prokaryotic type
rRNA helicases
A4G13_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QIM67955
LinkDB
All DBs
Position
64631..66472
Genome browser
AA seq
613 aa
AA seq
DB search
MTETKITFGDLGLPEFILSAVSDMGFETPSPIQQACIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLAQIDIEEKHPQMLVMAPTRELAIQVAEACELFTKNAKGVHIATLYGGQRYDIQLR
ALRQGAQVVVGTPGRILDHIRRGTLNLSELKFIVLDEADEMLRMGFIDDVETVMAELPAQ
HQTALFSATMPEPIRRITKRFMTDPQEVKIQSTQRTNPDIAQSCWYVRGYRKNEALLRFL
EVEDFDGAIIFTRTKTGTLDVTELLEKHGFRAAALNGDMTQQLREQTLDRLRNGSLDILV
ATDVAARGLDVERISLVVNYDIPLDAESYVHRIGRTGRAGRSGSAILFVEPRERRLLSNI
ERLMKKPIEEVDVPNHEALQARRREKFKAKITKQLEHHDLEQYRLLLEGLFTPDQDQEDI
AAAMLMLLQGKQKLILPPEPPMEKRGRRERDDRRGERGDRRERRPEERRGYGNPQPMDLY
RIEVGRADGVDVRHIVGAIANEGDINSRNIGHIKLYDEYSTVELPQGMPKELLQVFGKAR
VLNKQMRMTFVSEAGETVGRERHEGRRNDRRDNGFRREERRFNDRGNRAFNERAPRREFR
ERNDRRDRRDRRS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaactaaaatcacttttggggatttaggcctgcctgaattcattctttctgct
gtttccgacatggggtttgaaacgccttcaccaattcaacaagcatgtattccgcattta
ttaaacggtcgtgacgtgttaggtatggcgcaaaccggtagcggtaaaacggcggcattc
tcacttccattgttagcgcaaattgatatagaagaaaaacatccgcaaatgctggtgatg
gcgccaacccgtgagcttgcaattcaggtagcggaagcttgtgaactatttactaaaaat
gcaaaaggtgttcacattgcgacactttatggcggtcaacgctatgacatccaattacgc
gcattacgccagggcgcacaggttgtagtcggaacaccgggccgtattttagatcatatc
cgccgcggcaccttaaatctttccgagttaaagttcatcgtattggatgaagcggacgaa
atgctgcgtatgggctttattgatgatgtggaaaccgtgatggcggaattgccggcacaa
catcaaaccgcgcttttctcggcaaccatgccggaaccgattcgccgtataaccaaacgt
tttatgacggatccgcaagaggtaaaaattcaatctactcaacgcactaatccggatatt
gcgcaaagttgttggtatgtgcgcggttatcgtaaaaatgaagccttgttgcgttttctt
gaagtggaagattttgatggagccattatctttacccgcactaagaccggtactttagac
gttaccgaactattggaaaaacacggtttccgtgccgccgcattaaacggcgatatgact
cagcaactgcgcgaacagactttagatcgcctacgtaacggtagcctggatattttagtg
gcgacagacgttgccgctcgcggtttggacgttgaacgtattagtttggtggtaaattat
gatattccgttagatgcggaatcttacgttcaccgcatcggtcgtaccggtcgcgcgggt
cgttccggtagcgcaattttgtttgtagagccgcgcgaacgccgtttgttaagtaatatc
gaacgtttaatgaaaaaaccgattgaagaagtggacgtaccgaatcacgaagcgttacag
gctcgccgtcgtgaaaaattcaaagcgaaaattaccaaacaattggaacatcatgattta
gaacaatatcgtttattattagaaggtctgtttactccggatcaggatcaggaagacatt
gcggccgcaatgttgatgttattacaaggcaaacagaaattaattcttccgcctgagccg
ccgatggaaaaacgcggtcgccgcgaacgtgatgatcgtcgcggagagcgaggtgatcgt
cgtgaacgtcgtccggaagagcgccgcggttacggcaatcctcaaccgatggatttatac
cgtattgaagtcggtcgtgcggacggtgttgatgttcgtcatattgtcggtgcgattgcc
aacgaaggcgatattaacagccgtaatatcggtcatattaaactttatgatgaatattca
acggtagaattaccacaaggtatgccgaaagaattattacaggttttcggtaaggctcgt
gtgttaaataaacaaatgcgtatgacatttgtaagtgaagccggtgaaaccgtaggtcgt
gaacgtcatgaaggtcgccgtaatgatcgtcgtgataacggttttagacgtgaagaacgt
cgctttaatgacagaggaaaccgcgcttttaatgagcgggcgcctcgcagagagttcaga
gaacgtaatgatcgcagagaccgtagggatcgtcgcagttaa
DBGET
integrated database retrieval system
