Basfia succiniciproducens: A4G13_04705
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Entry
A4G13_04705 CDS
T06488
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bsun
Basfia succiniciproducens
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsun03016
]
A4G13_04705
Enzymes [BR:
bsun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A4G13_04705
Transfer RNA biogenesis [BR:
bsun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4G13_04705
Prokaryotic type
A4G13_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QIM68734
LinkDB
All DBs
Position
complement(1062620..1063537)
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AA seq
305 aa
AA seq
DB search
MSRPRKRGRDIHGIFLLDKPQGMSSNDILQKVKRIYQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYQVIAKLGERTDTSDAEGQVVETRSVNVTEQKILDSLPHFRGDIM
QVPTMFSALKHKGKPLYEYARAGIVVEREARPISIFELNFISYEAPYLTLEVHCSKGTYI
RTLVDDLGEYLGCGAHVSMLRRTAVSDYPADKMLTWEQLQQFAQDEDLAVLDARLLPVDS
AVSKLPVLSLSEEQTKAVGFGQRVKFDNLQQLQGQVRLFSPQNVFLGVAEIGKDNVIRPS
RMVNL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaccccgtaaacgcggtcgtgatattcacggcatatttttacttgataaacca
cagggaatgtcgtctaacgatattttgcagaaggtaaaacgtatttatcaggcaaataaa
gcagggcatacgggcgcattggatccattggcaacaggaatgttgccgatttgtttaggt
gaggcgacaaaattttctcagtttttattggatgcggataaacgttatcaggtgattgcg
aaattaggcgaacgtacggatacttccgatgcggaaggacaagttgtagaaacccgctcc
gtgaatgtaacggaacaaaaaatccttgattctttaccgcactttcgcggcgatattatg
caggttcccactatgttttccgccttgaaacataagggtaaacctctttacgaatatgcc
agagcggggattgttgtagagcgtgaagcccgcccgattagcattttcgagcttaatttt
attagctatgaagcgccttatttaacacttgaagtgcattgttcaaaaggtacgtatatt
cgtacgttagtggacgacttaggcgaatatctgggttgcggcgctcatgtaagcatgctt
agacgtaccgccgtatccgattatccggcggataaaatgctgacttgggaacaattgcag
caatttgcgcaagacgaagatctagccgtattagacgcccgtttattgccggtggacagc
gccgtatcaaaattacctgttttaagtttgagcgaagagcaaacaaaagccgtgggtttc
ggtcagcgggtaaagtttgataatcttcagcaactgcaagggcaagttcgtttgttttcg
ccgcaaaatgtgtttttaggggtagcggaaataggtaaggataatgtaattcgccccagc
cgaatggtgaatttataa
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