Basfia succiniciproducens: A4G13_04820
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Entry
A4G13_04820 CDS
T06488
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bsun
Basfia succiniciproducens
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsun03016
]
A4G13_04820
Enzymes [BR:
bsun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A4G13_04820
Transfer RNA biogenesis [BR:
bsun03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A4G13_04820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
DUF3859
TRAM
HTH_66
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QIM68755
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All DBs
Position
1086444..1088423
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AA seq
659 aa
AA seq
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MFQNNPLLSQLKQQLHDSKPHVEGVVKGTDKAYGFLETEKETFFIAPPAMKKVMHGDKIK
AAIETIGDKKQAEPEELIEPMLTRFIAKVRFNKDKKLQVLVDHPNINQPIGAAQAKTVKQ
ELKEGDWVVATLKTHPLRDDRFFYAQIAEFICSAEDEFAPWWVTLARHEQSRYPVQGQEV
YSMLDTETRRDFTALHFVTIDSENTQDMDDALYIEPVTGPNDEQTGWKLAVAIADPTAYI
ALDSQIEKDARKRCFTNYLPGFNIPMLPRELSDELCSLMENETRAALVCRLETDMQGEIV
GEPEFILAQVQSKAKLAYNNVSDYLEQVENAWQPENESTQQQINWLHQFALVRINWRKKH
GLLFKEKPDYSFVLADNGHVREIKAEYRRIANQIVEESMIIANICCAHYLAKNAQTGIFN
THVGFDKKFLPNAHNFLMANLSNEENQQELAERYSVENLATLAGYCRMRHDIEPIEGDYL
EFRLRRFLTFAEFKSELAPHFGLGLTGYATWTSPIRKYSDMVNHRLIKACLANRECVKPS
DETLARLQEARKQNRMVERDIADWLYCRYLADKVESNPEFRAEVQDCMRGGLRVQLLENG
ASVFVPASSIHPNKDEIQVNTDELALYINGERRYKIGDIVNIRLTEVKEETRSLIGNLV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaacaatcctttattatctcaattaaaacaacaattacacgacagtaagccg
cacgttgaaggcgtggtgaaaggcacggataaagcctacggtttcttagaaacggaaaaa
gaaactttcttcattgcgccgccagccatgaaaaaagtgatgcacggcgataaaataaaa
gcggcaatcgaaactatcggcgataaaaaacaggcggagcctgaagaattaattgaaccg
atgctgacccgttttatcgcaaaagtgcggttcaataaagataaaaaattacaagtcctg
gttgatcaccccaatattaatcagcctatcggcgccgcccaagccaaaaccgtcaaacag
gaactcaaagagggcgattgggtggtggcgacgttaaaaacccatccgctacgcgatgat
cgtttcttttatgcgcaaattgccgaatttatttgttcggcagaggacgaattcgcccct
tggtgggtaaccctcgcgcgtcacgaacagtcccgttacccggttcaaggtcaagaagtt
tattccatgttagatacggaaacccgccgggatttcaccgcacttcatttcgtcaccatc
gacagtgaaaatacgcaggatatggacgatgccctttatatcgagcctgttaccggccca
aacgacgaacagacgggctggaagcttgcggtagcgattgctgatcctaccgcttatatc
gcccttgactcacaaattgaaaaagatgcccgcaaacgctgtttcactaattatttgccg
ggatttaacattccgatgctgcctcgggaactatccgacgaactttgttcattaatggaa
aatgaaacccgcgcggcgcttgtttgccgactcgaaaccgatatgcagggcgaaatcgtc
ggcgaacccgaatttatattagctcaggtacaatcgaaagctaaactggcttataacaac
gtatccgactatttagaacaagtcgagaacgcctggcaacctgaaaacgaaagtactcaa
caacaaattaattggctgcaccagtttgccttggttcgcattaactggcgaaaaaaacac
gggttattattcaaagaaaaaccggattacagtttcgtactggcggataacggtcatgtg
cgtgaaattaaggcggaatatcgtcgcattgccaaccaaatcgtggaagaatccatgatt
atcgccaatatttgttgcgcgcattatttggcgaaaaatgcgcaaaccgggattttcaat
actcatgtaggattcgataaaaaattcctgccgaacgcccataatttcttaatggcaaat
ctgagtaacgaagaaaaccaacaggaattagccgagcgttattccgtggaaaatttagct
accttagcgggctattgccgtatgcgacatgatattgaaccaattgaaggcgattatctg
gaattccgtttacgtcgtttcctgacctttgcggaatttaagtcggaactcgcaccgcat
ttcggtttaggtttaacgggttacgccacctggacctcaccaatccgtaaatattccgat
atggtgaatcaccgcttaattaaagcctgtctagctaaccgggaatgtgtaaaaccgagc
gatgaaactcttgcccgcttgcaggaagcccgtaaacaaaaccgtatggtggaacgtgat
attgccgattggctatactgccgttatctggcggataaagtggaaagcaacccggaattc
cgggcggaagtacaggattgcatgcgcggcggtttacgggtgcaattattggaaaacggt
gcaagcgtattcgtgccggcctcaagtattcatccgaacaaagacgaaattcaagtcaat
accgatgaactggccctttatattaatggcgaacgccgttataaaatcggcgacatcgtt
aacattcggttgacggaagtaaaagaagaaacccgtagcctgatcggcaacctggtttaa
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