Basfia succiniciproducens: A4G13_06425
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Entry
A4G13_06425 CDS
T06488
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
bsun
Basfia succiniciproducens
Pathway
bsun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G13_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsun03019
]
A4G13_06425
Enzymes [BR:
bsun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4G13_06425
Messenger RNA biogenesis [BR:
bsun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4G13_06425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SNF2-rel_dom
CMS1
DUF7471
Motif
Other DBs
NCBI-ProteinID:
QIM69044
LinkDB
All DBs
Position
1424606..1425859
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AA seq
417 aa
AA seq
DB search
MSLDHLSQQRFADLPLNAKVLEALESNGFEYCTPIQALSLPISLAGKDVAGQAQTGTGKT
MAFLTATFHHLLEHPVKTNHPRALIMAPTRELAVQIAHDAERMVKTTGLKTALAYGGDGY
DKQLKAIEAGADIIIGTTGRIIDYVKQNIIALSHIQVVVLDEADRMFDLGFIKDIRYLMR
KCPSPKQRLTLLFSATLSYKVRELAFEDMNDPEYVEVEPLQKTGHRIKEELFYPSNEDKM
PLLITLLEEEWPERCIIFANTKHQCEKIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTD
GALDILVATDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEEY
AMNLPAIEEYIGHHIAVSQYDPDSLIRDLAKPYRLKPSLPASNRHNRNGAKPFKKRF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagatcatttaagccaacaacgtttcgccgatttaccccttaatgccaaagta
ttggaagccttagaaagtaacggcttcgaatattgtacgccgattcaggcgctttcgttg
cctatttcattggcgggtaaagacgttgccgggcaggcgcaaaccggtaccggcaaaacc
atggcgtttttaaccgcaactttccaccatttattggaacatcccgttaaaacgaatcat
ccgcgggcgttgattatggcgccgaccagagaacttgcggtacaaatcgctcatgatgcg
gaacgtatggtgaaaaccaccggtttaaaaaccgcacttgcctatggcggtgacggttat
gacaaacagctgaaagccattgaagcgggtgcggatattattatcggcactaccggacgc
attattgattatgtgaaacaaaatattattgctttatcgcatattcaggtggtggtgctg
gatgaagcggatcgcatgttcgatctcggttttattaaagatattcgctatttaatgcgc
aaatgcccttcacctaagcagcgccttactttgctgttttccgcaaccctttcttacaaa
gtgcgggagctggcgtttgaagatatgaatgatcccgaatatgtggaggtggaaccgctg
caaaaaaccggtcaccgcattaaagaggaattattttatccttccaatgaagataaaatg
ccgttgcttatcactttattagaagaagaatggccggagcgttgcattatttttgccaat
accaaacatcaatgcgagaaaatctggggttatttagccgccgacggtcatcgtgtgggt
ttgctgaccggtgatgtcgcgcagaaaaaacgtttatctctgctgaaacagtttaccgac
ggcgctttggatattttagtggcgacggatgtggcggcgcgcggcttacatattccggat
gttactcacgtatttaattatgatttgccggacgaccgggaagattacgtacaccgcatc
gggcgaaccggtcgtgcgggggaaagcggcgtttccattagtttcgcctgcgaagaatat
gcgatgaatctgcctgccatcgaagaatatatcgggcaccatattgctgtaagtcaatat
gatcccgactcgttaattcgcgatttggcaaaaccttaccgtttaaaaccgagtctgccg
gcaagcaatcgccataatcgaaacggggcaaagcctttcaaaaaacgtttttaa
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