Basfia succiniciproducens: A4G13_09550
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Entry
A4G13_09550 CDS
T06488
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bsun
Basfia succiniciproducens
Pathway
bsun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4G13_09550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsun03021
]
A4G13_09550
03400 DNA repair and recombination proteins [BR:
bsun03400
]
A4G13_09550
Enzymes [BR:
bsun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4G13_09550
Transcription machinery [BR:
bsun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4G13_09550
DNA repair and recombination proteins [BR:
bsun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4G13_09550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QIM69617
LinkDB
All DBs
Position
2060297..2064559
Genome browser
AA seq
1420 aa
AA seq
DB search
MKDLVKFLKAQSKTSEDFDVIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFESYIVIEPGMTDLEKGQLLTEEQFMDAEDRWADEFDAK
MGAEAIQALLRDMDLEHECETLREELQETNSETKRKKITKRLKLLEAFMQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLRLHQCGLPKKMALELFRPFIYAKLESRGFASTIKAAKKMVEREDAIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAMQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPANGDPIIVPSQDVVLGIYYMTREKVNAKGEGMLLQDPREAEKAYRT
GRAELHSRVKIRITEYVKNAEGEFEPQTTLTDTTIGRAILWMIAPKGMPYSLFNQTLGKK
AISKLINECYRRLGVKASVMFADQIMYTGFAYAARSGSSVGIDDMVIPEKKYEIISAAEA
EVAEIQEQFQSGLVTAGERYNKVIDIWATANERVAKAMMENLSTEEVVNREGNLEKQSSF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIVEDDCGTHEGIVMTPLIEGGDEKVSLRELV
LGRVAAEDILKPGTEEVLFPRNTLLDEKVCDILDENSVDSVKVRSVVTCDTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSVQVKNSGSIR
LTNVKSVTNNEGKLVVTSRNTELTIIDAFGRTKEHYKVPYGAVLNKGDGEAVTAGETVAN
WDPHTMPVVSEVAGFVKFVDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPAIK
VVDAQGNDIFIPGVDVLAQYFLPGKAIVTLDDGAEVQVGEPLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEITGIVSFGKETKGKRRLVITPVEGEAYEEMIPKWRQLNVFE
GEMVERGDVISDGAETPHDILRLRGVHAVTEYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKGIITKAYDSEFLEGEQVEVARVKIVNRKREAEGKPPVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHQNRIKNRGQANVVE
EQEVKFSAADEAEIEAEFNMIAEDPAASLAEMLNMADDAE
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagttaagtttttaaaagcacaatcaaaaacttcagaagattttgatgtg
attaaaattggtttagcatcacccgacatgatccgttcatggtcattcggtgaagtaaaa
aaaccggaaacaatcaactaccgtaccttcaaaccggaacgtgacggtcttttctgcgca
cgtattttcgggccggtaaaagattacgaatgtttatgcggtaaatataaacgtttaaaa
catcgtggcgttatttgtgaaaaatgtggtgtagaagttacccaaaccaaagttcgtcgc
gaacgtatgggtcacattgaacttgcctcaccggttgcgcacatttggtttttaaaatcc
ctgccgtcccgtatcggtttattattggatatgccgttacgcgatatcgaacgcgtttta
tatttcgaatcatatattgtgatcgaaccgggtatgactgatcttgaaaaaggtcaatta
ttaaccgaagaacaattcatggacgcagaagatcgctgggccgatgaatttgatgcgaaa
atgggtgcggaagcaatccaagccttattgcgcgatatggatttagaacacgaatgtgaa
actttgcgcgaagagttacaggaaaccaattccgaaacaaaacgcaaaaaaatcactaaa
cgcttgaaattattagaagcgtttatgcagtccggtaacaaaccggaatggatggtaatg
accgtattacctgtgctgccgccggatttacgtccgttggtgccgttggacggcggtcgt
ttcgctacttcggacttaaacgatttatatcgtcgcgtaatcaaccgtaataaccgttta
aaacgtttattggatttagttgcgccggatattatcgtacgtaacgaaaaacgtatgttg
caagagtctgtggatgcattattggataatggtcgtcgcggtcgtgcgattaccggttct
aacaaacgtccgttaaaatctttggctgatatgatcaaaggtaaacagggtcgtttccgt
caaaacttacttggtaaacgtgttgactattcaggtcgttccgtaattaccgttggtcct
tacctacgtctgcaccaatgcgggttaccgaagaaaatggcgttggaattattccgtccg
tttatttacgctaaattagaaagccgtggctttgcttcaacaatcaaagcggcgaagaaa
atggttgaacgtgaagacgctatcgtatgggatattctggcggaagtcattcgcgaacat
ccgattttgttaaaccgtgcgccaaccttgcaccgtttgggtattcaggcatttgaacct
atcttaatcgaaggtaaagcaatgcagttacacccgcttgtttgtgcggcgtttaacgcg
gacttcgatggtgaccaaatggcggttcacgtacccttgacacttgaagcgcaattggaa
gcccgcgcgttaatgatgtcaaccaataacgtgttatcaccggcgaacggtgatccgatt
atcgttccttcacaagacgttgtattaggtatctactatatgacgcgtgaaaaagtgaac
gcgaaaggcgaaggtatgttattgcaagatccgcgcgaggcggaaaaagcttaccgtact
ggtcgtgcggaattacattcgcgcgtgaaaatccgtattaccgaatatgtgaaaaatgcc
gaaggtgagtttgaaccgcaaacaaccttaacggatactacaatcggtcgtgccatttta
tggatgattgcacctaaaggtatgccgtatagtttgtttaaccaaacgctcggtaaaaaa
gcgatttctaaattaatcaacgaatgctaccgtcgtttaggcgtgaaagcgagtgttatg
tttgccgaccaaattatgtacacaggttttgcttacgccgctcgttcgggctcatccgtc
ggtatcgacgatatggttattccggagaaaaaatacgaaattatttccgctgcggaagcc
gaagttgccgaaattcaggaacagttccaatccggtcttgtgactgcgggcgagcgttac
aataaagtgatcgatatttgggcgacggcaaacgaacgcgttgctaaagcgatgatggaa
aatctttctacggaagaagtggttaaccgtgaaggtaatcttgagaaacaatcttctttc
aacagcatctttatgatggcggattccggtgcccgtggttccgcagcacagattcgtcag
ttagcgggtatgcgtggtctgatggctcgtccggacggttcgatcattgaaaccccgatt
accgcgaatttccgcgaaggtttgaacgtattacagtactttatttcaacccatggtgcg
cgtaaaggtttggcggataccgcgttaaaaacagcgaactcaggttatttaacccgtcgt
ttggttgacgtggcgcaagacttggttatcgttgaagacgactgcggtacgcacgaaggt
atcgttatgactccgcttatcgaaggcggtgatgaaaaagtatcgttacgcgaactcgta
ttaggtcgtgtagcggcggaagatatcttaaaaccgggtacggaagaggtattattcccg
cgtaacacattattagatgaaaaagtgtgtgatatccttgatgaaaattcagtggatagc
gtgaaagtacgttcggttgtaacctgtgataccgatttcggcgtttgtgcgaaatgttac
ggccgtgatctggctcgcggtcacttgattaaccaaggtgaagcggtcggtgttattgct
gcgcagtcaatcggtgaaccgggtacacagttaaccatgcgtactttccatatcggtggt
gcggcatctgcggcggctaaagaatccagcgttcaggtgaaaaacagtggttctatccgt
ttaacaaacgtgaaatccgttaccaataacgaaggtaaattagtggttacctcacgtaat
accgaattaaccattattgatgctttcggtcgtactaaagagcattataaagtgccttac
ggtgcggtattgaacaaaggcgacggcgaagcggtaacagcgggcgaaacggtagcaaac
tgggatccgcatacaatgccggttgtctccgaagtagcgggttttgtgaaatttgtggat
attgttgacggtttaaccgttactcgtcaaaccgacgaattaacaggtttatcttctatt
gtggtacaagacgtgggtgaacgcgcaaccgcaggtaaagatttacgtcctgcgattaaa
gttgttgacgcgcaaggcaacgatatctttattccgggcgtagatgtgcttgcccaatac
ttcttaccgggtaaagccattgttactctagacgacggtgcggaagtccaggtcggtgaa
cctttagcccgtattccgcaagaatccgttggtactaaagatattaccggcggtcttccg
cgcgtagccgacttgttcgaagcgcgcaaaccgaaagaacctgcaatccttgcggaaatt
acaggtatcgtttcattcggcaaagaaaccaaaggtaaacgccgcttggttatcacaccg
gttgaaggcgaagcatacgaagaaatgattccgaaatggcgtcagttgaacgtattcgaa
ggcgaaatggttgaacgcggcgacgtaatctccgatggcgcggaaactccgcatgatatt
ttacgtttacgcggcgtacacgcagtaaccgagtatatcgttaatgaagtacaagaagtt
taccgcttacaaggggtaaaaattaatgataaacatatcgaagttatcgtacgtcaaatg
ttacgtaaaggcatcatcactaaagcttacgattctgaattcttagaaggtgagcaagtg
gaagtggcgcgcgttaaaattgtgaaccgtaaacgtgaagccgaaggtaaaccgccggta
gaattcgaacgcgaattgctcggtattaccaaagcttcactggcaaccgagtcatttatc
tcggcggcatcgttccaggaaacaacccgcgtgttaacggaagctgcggttgcaggtaaa
cgtgacgaattacgaggcttgaaagagaatgtaatcgtaggtcgtttaatcccggcaggt
accggtttcgcttatcatcaaaaccgcattaaaaaccgcggtcaggcgaacgttgttgaa
gagcaagaagtaaaattctctgcggcggacgaagcggaaattgaagctgaatttaatatg
atagcggaagacccggcagcgagtcttgccgaaatgttaaatatggcggatgatgcggaa
taa
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