Bacillus subtilis subsp. subtilis OH 131.1: Q433_13785
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Entry
Q433_13785 CDS
T03469
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bsus
Bacillus subtilis subsp. subtilis OH 131.1
Pathway
bsus02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsus00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q433_13785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsus03021
]
Q433_13785
Transcription machinery [BR:
bsus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q433_13785
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
HTH_20
COR
Motif
Other DBs
NCBI-ProteinID:
AIC98907
LinkDB
All DBs
Position
complement(2453062..2454177)
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AA seq
371 aa
AA seq
DB search
MADKQTHETELTFDQVKEQLTESGKKRGVLTYEEIAERMSSFEIESDQMDEYYEFLGEQG
VELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAKEE
IAYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDY
RKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPE
EIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYELLK
EQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHP
SRSKRLKDFLE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccacgagacagaattaacattcgaccaagtaaaagagcaatta
acagagtctggtaaaaaacgtggcgttttgacatatgaagaaattgctgagcgtatgtcc
agctttgaaattgaatcagaccaaatggatgagtattatgaatttttaggtgaacaaggt
gttgaattaattagtgagaatgaagaaacagaagatcctaatattcagcagcttgccaaa
gccgaagaagaatttgaccttaatgacctaagtgtaccgcctggcgttaaaatcaatgac
ccagttcgtatgtatttaaaggaaatcggtcgggttaaccttctttctgcaaaagaagaa
atcgcctacgctcaaaagattgaagaaggtgacgaagaatctaaacgcagattggctgaa
gcgaacctgcggcttgttgtcagtatcgcaaaacggtatgtcggacgcggtatgctgttc
cttgatctgatccaggaaggaaacatgggcctgatgaaagccgttgaaaaatttgattat
cgcaaaggttataaattcagtacgtatgctacgtggtggatcagacaggcgattacacgc
gccattgccgatcaggcgagaacgatccggattcccgttcatatggttgaaaccattaat
aaattaatccgtgtgcagcgtcaattactgcaagacttaggcagagaaccaacacctgaa
gaaattgcggaagatatggatttaacgcctgaaaaagtacgcgaaatcttaaagattgct
caagagccggtatctctggaaacaccgatcggtgaagaggatgactcgcaccttggtgat
ttcattgaagaccaagaagcaacttcaccttctgaccacgccgcatacgagctattgaaa
gagcagctggaagatgtgcttgatacgttaactgatcgtgaagaaaatgtattgcgtctt
cgattcggtcttgatgacggccgtacaagaacattagaagaggtcggcaaagtatttgga
gtaacgagagagcgtattcgacaaatcgaagccaaagcgttgcggaaactaagacatcct
agcagaagtaaacgtttgaaagatttccttgaataa
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