Bacillus subtilis subsp. subtilis AG1839: BSUB_00501
Help
Entry
BSUB_00501 CDS
T03442
Symbol
cshA
Name
(GenBank) ATP-dependent RNA helicase; cold shock
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsut
Bacillus subtilis subsp. subtilis AG1839
Pathway
bsut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSUB_00501 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsut03019
]
BSUB_00501 (cshA)
03009 Ribosome biogenesis [BR:
bsut03009
]
BSUB_00501 (cshA)
Enzymes [BR:
bsut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSUB_00501 (cshA)
Messenger RNA biogenesis [BR:
bsut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSUB_00501 (cshA)
Ribosome biogenesis [BR:
bsut03009
]
Prokaryotic type
rRNA helicases
BSUB_00501 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIC43060
LinkDB
All DBs
Position
494703..496187
Genome browser
AA seq
494 aa
AA seq
DB search
MTITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIP
LVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKK
NPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTL
LFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQS
PELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTT
KRKMDRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYMTAAAELLEDHDAVTVVAAAI
KMATKEPDDTPVRLTDEAPMVSKRYKNQRSSKRRDGQGGGYRGGKGKSNNRSSYDKKRSN
DRRSSGDRRQKKSY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgactataacgtttcaagattttaatttaagttctgatctcatgaaagcaattaatcgt
atgggatttgaagaagcaacaccgattcaggcacaaacgataccgctcggactttcaaat
aaagacgtcattggacaagcgcaaacaggtacaggtaaaacagctgcgtttggtataccc
cttgttgaaaaaattaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacc
cgtgaattagccattcaagtatctgaagaattgtataaaatcggacaagataaacgtgcg
aaggttcttcctatttacggcggacaggatattggacggcaaatccgggcgttaaagaag
aatccgaatattattgtcggaacacctggacgtcttcttgaccacatcaaccgccgcacc
attcgtttaaacaatgtaaataccgttgtaatggatgaagcggatgaaatgctgaacatg
ggattcattgacgatattgaatctatcctttcaaacgtgccaagcgagcatcagacactt
ctgttctctgccacaatgcctgcgccgatcaaacgcattgcagagcgcttcatgactgag
ccggaacacgtaaaagtaaaagcgaaagaaatgacggtttctaacattcagcagttctat
ttggaagtgcaagaacgtaaaaaattcgatacactgactcgccttcttgatattcagtct
cctgagcttgcgatcgtattcggacgtacaaaacgccgtgtcgatgagctggctgaagct
ctgaaccttcgcggatatgcagctgaaggtattcacggtgacttaacgcaggcgaaacgt
atggttgcgcttcgtaaatttaaagaaggcgcaatcgaagttctagtcgcaactgatgtt
gccgctcgcggacttgatatctcaggtgttacacacgtatacaacttcgacgtgcctcaa
gatcctgaaagctacgttcaccgtatcggaagaacgggccgtgcaggaaaaacaggtatg
gcgatgacgttcattacaccgcgtgagaaaagcatgcttcgcgcaattgaacaaacaaca
aaacgcaaaatggaccgcatgaaggagcctacacttgatgaagcgttagaaggtcagcaa
caggttactgttgaacgtcttcgcacaacaatcagtgaaaacaacctgaacttctacatg
acagcggcagctgagctgcttgaagatcatgatgcagtaacagtggttgcggcggctatc
aaaatggctacaaaagagccagacgacacaccggttcgcttaacagacgaagcgccgatg
gtcagcaaacgctacaagaaccagcgctcttctaaacgcagagacggtcaaggcggcggc
taccgcggcggaaaagggaaaagcaacaaccgttcttcctatgacaaaaagcgttcaaac
gatcgccgttcttcaggtgacagacgccagaaaaaatcttactaa
DBGET
integrated database retrieval system
