Bacillus subtilis subsp. subtilis AG1839: BSUB_01743
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Entry
BSUB_01743 CDS
T03442
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsut
Bacillus subtilis subsp. subtilis AG1839
Brite
KEGG Orthology (KO) [BR:
bsut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsut03032
]
BSUB_01743 (topA)
03400 DNA repair and recombination proteins [BR:
bsut03400
]
BSUB_01743 (topA)
Enzymes [BR:
bsut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSUB_01743 (topA)
DNA replication proteins [BR:
bsut03032
]
Prokaryotic type
DNA Topoisomerases
BSUB_01743 (topA)
DNA repair and recombination proteins [BR:
bsut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSUB_01743 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_3
Zn_ribbon_ACC
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AIC44261
LinkDB
All DBs
Position
1667212..1669287
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AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTIDGTFLKGQETFEASFFGKNGKKLPLNSEADVKEILSQLKGNQYTVEK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGREGTVGLITYMR
TDSTRISNTAVDEAAAFIDQTYGKEFLGGKRKPAKKNENAQDAHEAIRPTSVLRKPSELK
AVLGRDQMRLYKLIWERFVASQMAPAVLDTMSVDLTNNGLTFRANGSKVKFSGFMKVYVE
GKDDQMEEKDRMLPDLQEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEERGIGRPSTY
APTLDTIQRRGYVALDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEEGN
TEWVKIIDNFYTDFEKRVKKAESEMKEVEIEPEYAGEDCELCSSPMVYKMGRYGKFLACS
NFPDCRNTKPIVKQIGVKCPSCGEGNIVERKSKKKRVFYGCDRYPDCEFVSWDKPIERKC
PKCGKMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgcccgctaaggcgaaaacgattgaacgttac
ttaggtaaaaaatataaagtaaaagcatcaatgggacatgtccgggatcttccaaaaagt
caaatgggagttgacatagaacagaattttgaaccgaaatatattaccattcgaggtaaa
ggcccggtattaaaagagctgaaaacggctgcgaaaaaagccaaaaaagtgtatctcgca
gctgaccccgacagagaaggggaagcgattgcatggcatttggcacacagtcttgattta
gatctcaactcagactgccgtgtggtgtttaacgaaattacaaaagacgctattaaggaa
tcgtttaagcatccccgcatgatcaatatggatttagtggatgcacagcaagcgagacgt
attttagacaggcttgtcggatataaaatcagtccaatcttatggaaaaaagtcaaaaaa
gggcttagcgcaggacgcgtgcaatccgttgccctccgtttgattattgaccgtgaaaaa
gagattaacgactttaagcctgaggaatattggacaattgacggtacgttcttaaaaggt
caagaaacctttgaagcgagctttttcgggaaaaacggcaaaaaacttcctttaaatagt
gaagctgatgtaaaagagattctttctcagctcaaagggaatcaatatacagttgaaaaa
gtaaccaaaaaggaacgcaaacgtaatcctgctttgccttttaccacttctaccctgcag
caggaagcggctcgcaagctcaatttcagagcgaagaaaacgatgatgattgcacagcaa
ttatatgaaggaattgatttaggaagagaaggaacggttggtctgatcacgtatatgaga
acggattcaacccgtatttcaaatacggctgttgatgaagcagctgcatttattgatcag
acatatggaaaagagttcctaggcggaaaacggaagcctgcgaaaaagaatgaaaatgcc
caggatgcccacgaagcaattcggccgacatcagttcttagaaaaccaagtgaattaaaa
gcagtcctcggcagagaccaaatgagactgtataaattaatttgggagcgttttgttgcc
agccaaatggcaccggctgttctcgatacaatgagtgtcgacctgacaaacaacggtttg
acatttcgtgcaaatggaagtaaagtcaagttttccgggtttatgaaggtgtatgttgaa
ggaaaagacgatcaaatggaagaaaaagaccggatgctgcctgacttacaagaaggcgac
acggtattatcaaaagatatagaacctgagcagcattttacccagccgcctccgcgatat
actgaggcccggcttgttaaaacccttgaagaacgcggtatcggccgtccatccacatat
gctccgacacttgatactattcagcggcgcggctacgtggcattggataataaacgtttc
gttccgactgaattaggtcagatcgttcttgacttgatcatggagtttttccctgagatc
attaacgttgagtttacagctaaaatggagagagatcttgatcatgttgaagaaggaaat
accgaatgggtcaagattatcgataatttctacaccgattttgaaaaacgcgtcaaaaaa
gccgaatcggaaatgaaggaagttgagattgaaccagagtatgctggagaggattgtgaa
ttgtgcagttctccaatggtatataaaatgggacggtacggtaaattcttagcttgctcc
aacttccctgactgccggaacacgaaaccgattgtgaaacaaatcggtgtgaagtgcccg
agctgcggagaaggaaacattgttgagcgaaaatcgaaaaagaaacgggtgttttacggc
tgtgaccgttatccggactgtgaattcgtatcatgggacaaaccaattgaacgaaaatgc
ccgaaatgcggaaaaatgctcgtcgagaaaaaactcaaaaaaggtatacaagtccaatgc
gtggaatgcgattataaggaagaaccacagaagtag
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