Bacillus subtilis subsp. subtilis AG1839: BSUB_01779
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Entry
BSUB_01779 CDS
T03442
Symbol
sigD
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
bsut
Bacillus subtilis subsp. subtilis AG1839
Pathway
bsut02020
Two-component system
bsut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsut00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSUB_01779 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BSUB_01779 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsut03021
]
BSUB_01779 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bsut02035
]
BSUB_01779 (sigD)
Transcription machinery [BR:
bsut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSUB_01779 (sigD)
Bacterial motility proteins [BR:
bsut02035
]
Flagellar system
Flagellar assembly proteins
Stator
BSUB_01779 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
IF2_N
UPF0175
DUF7096
Motif
Other DBs
NCBI-ProteinID:
AIC44297
LinkDB
All DBs
Position
1700044..1700808
Genome browser
AA seq
254 aa
AA seq
DB search
MQSLNYEDQVLWTRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVSPAEIAEELGMTVQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAEKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKNLLEKVIQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattatgaagatcaggtgctttggacgcgctggaaagagtggaaagat
cctaaagccggtgacgacttaatgcgccgttacatgccgcttgtcacatatcatgtaggc
agaatttctgtcggactgccgaaatcagtgcataaagacgatcttatgagccttggtatg
cttggtttatatgatgcccttgaaaaatttgaccccagccgggacttaaaatttgatacc
tacgcctcgtttagaattcgcggcgcaatcatagacgggcttcgtaaagaagattggctg
cccagaacctcgcgcgaaaaaacaaaaaaggttgaagcagcaattgaaaagcttgaacag
cggtatcttcggaatgtatcgcccgcggaaattgcagaggaactcggaatgacggtacag
gatgtcgtgtcaacaatgaatgaaggtttttttgcaaatctgctgtcaattgatgaaaag
ctccatgatcaagatgacggggaaaacattcaagtcatgatcagagatgacaaaaatgtt
ccgcctgaagaaaagattatgaaggatgaactgattgcacagcttgcggaaaaaattcac
gaactctctgaaaaagaacagctggttgtcagtttgttctacaaagaggagttgacactg
acagaaatcggacaagtattaaatctttctacgtcccgcatatctcagatccattcaaag
gcattatttaaattaaagaatctgctggaaaaagtgatacaataa
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integrated database retrieval system
