Bacillus subtilis subsp. subtilis AG1839: BSUB_01810
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Entry
BSUB_01810 CDS
T03442
Symbol
rnjB
Name
(GenBank) ribonuclease J2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bsut
Bacillus subtilis subsp. subtilis AG1839
Pathway
bsut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSUB_01810 (rnjB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsut03019
]
BSUB_01810 (rnjB)
Messenger RNA biogenesis [BR:
bsut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSUB_01810 (rnjB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AIC44328
LinkDB
All DBs
Position
1732968..1734635
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AA seq
555 aa
AA seq
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MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYL
IERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRKTDLR
EIHSKSVITFESTKVSFFRTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPALNQTCDIG
EIAKIGNSGVLALLSDSANAERPGYTPSEAAVSGEISDALYNSQNRVIIAVFASNINRIQ
QVIHAAAQNGRKIAVAGKNLQSVLQLARKLGYIEADDELFISVQDVKKYPKREVAIITAG
SQGEPLAALTRMANKAHKQLNIEEGDTVVIASTPIPGQELIYSKTVDLLARAGAQVIFAQ
KRVHVSGHGSQEELKLMINLLKPKYLIPVNGEYRMQKAHSKIAEETGMKRSDIFLIEKGD
VVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKQKKHL
VSGPEIITRGFVYVRESEGLIVQATELVRSIVTEATETSNVEWSTLKQAMRDALNQFLYE
KTKRKPMIIPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaaaatacagaaaacgttagaattatcgcccttggcggtgtcggagagatt
gggaagaacctttatgtcattgaaattgactcagacatatttgtcgttgatgccggcctt
atgcatccagaaaacgaaatgctcggtattgatgtagtgattcctgacatatcatatttg
attgaacgggctgaccgcgtcaaggcaatctttttaacgcacgggcacgatgaaaatatc
ggcggcgttttttacttattaaacaagctgtccgttccagtgtacggaacaaaactgacg
cttgcactgttaagagagaaattaaaacaatacggacataaccgaaaaactgatttaaga
gaaattcactccaaatctgtcattacatttgaatcaacaaaggtatcgttctttagaacg
attcacagcattcctgattctgtaggtgtgagctttaaaacatcacttggatctattgta
tgcacgggagacttcaaatttgaccaaacacctgcacttaatcagacgtgcgacattggc
gagatcgccaagatcggcaatagcggcgtgctcgctctgctttctgacagtgcaaatgcg
gaacggccgggttacaccccttcggaagcggctgtcagcggagaaatttcggatgcgctg
tataattcacagaaccgggtgattattgctgttttcgcatccaatattaaccggattcag
caagtcattcatgcagcggctcaaaatggcagaaagattgccgtagccggaaaaaatctt
caatctgtcctgcagctggcgagaaagttaggatatattgaagcagatgatgaattgttt
atttctgtacaggatgtcaaaaaatatccgaagcgcgaagtggccattattacagccgga
agccaaggtgaaccattagctgctttgacaagaatggcaaacaaagctcacaaacagctg
aacattgaagaaggggatacggtggtcattgcgtcaactccgattcccgggcaggaactc
atttactctaaaacagtagatcttcttgcgagagccggtgcacaagtcatctttgcccaa
aagcgtgttcatgtatcaggccacggctcacaagaagagttaaagctgatgatcaacctg
cttaaaccaaaatatttgattcctgtaaacggcgaatacagaatgcaaaaagctcattca
aaaatcgctgaagaaaccggcatgaagcgcagtgacatcttcttaattgaaaaaggcgac
gtcgttgaattccgcggccaaaacgtaaaaattggggataaagttccttacggcaatatt
ttaattgatggtttaggtgtcggtgatatcggcaatatcgtattgagagaccgccgcttg
ctttcacaggacggaattttaatcgttgtcattacacttgataaacaaaagaaacatctt
gtatcaggaccagaaattatcactcgcggctttgtttatgtaagagagtctgaaggtctt
atcgtacaggctactgagcttgtacggtccatcgtgacagaagcgactgaaacatcaaat
gtcgaatggtcaacgctgaagcaggcaatgcgggatgctttgaaccaattcctttatgaa
aaaacgaaacgtaaaccgatgatcatcccaattattatggaagtataa
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