Bacillus subtilis subsp. subtilis AG1839: BSUB_03187
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Entry
BSUB_03187 CDS
T03442
Symbol
ytlP
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bsut
Bacillus subtilis subsp. subtilis AG1839
Brite
KEGG Orthology (KO) [BR:
bsut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsut03016
]
BSUB_03187 (ytlP)
Enzymes [BR:
bsut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BSUB_03187 (ytlP)
Transfer RNA biogenesis [BR:
bsut03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BSUB_03187 (ytlP)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AIC45693
LinkDB
All DBs
Position
complement(3043789..3044340)
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AA seq
183 aa
AA seq
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MPDIRPHYFIGVPIPEGIANPIYQAAKNEPILTFQKWVHPLDYHITLIFLGAADETQIKK
LEGSLAEIASEIDPFSIKFGKIDVFGDRRKPRVLHLEPKKNKTLDRLREHTKQAVLQAGF
QVEKRPYHPHMTLARKWTGEDGFPAHVPFESGEVSMMAERFSLFQIHLNQSPKYEEIFKF
QLS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgccagatatacggcctcattatttcatcggcgttcccatacctgagggaattgcaaat
ccgatctaccaggctgcgaaaaacgaaccgatattgacgtttcaaaaatgggtgcacccg
cttgactatcatatcacgttaatttttctcggagcggcggatgagacacaaataaagaag
cttgaaggttcgctagcagagattgcttcagaaattgatccattttcaattaagtttggc
aagatagatgtattcggcgaccgcagaaagccgcgcgttttacatctggagccaaagaaa
aacaaaacgcttgatagactgcgggaacatacgaagcaggctgtacttcaggccggcttt
caagtggaaaaaagaccgtatcatcctcatatgacgctggcaagaaaatggacaggcgaa
gatggatttccagctcatgttccgtttgaaagcggcgaggtttcgatgatggctgaacga
ttttcgctctttcaaatacacttgaaccaatcaccaaaatacgaggaaatattcaaattt
caattatcttaa
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