Bacillus subtilis XF-1: C663_2152
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Entry
C663_2152 CDS
T02459
Symbol
hupA
Name
(GenBank) non-specific DNA-binding protein HBsu; signal recognition particle-like (SRP) component
KO
K03530
DNA-binding protein HU-beta
Organism
bsx
Bacillus subtilis XF-1
Brite
KEGG Orthology (KO) [BR:
bsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsx03032
]
C663_2152 (hupA)
03036 Chromosome and associated proteins [BR:
bsx03036
]
C663_2152 (hupA)
03400 DNA repair and recombination proteins [BR:
bsx03400
]
C663_2152 (hupA)
DNA replication proteins [BR:
bsx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C663_2152 (hupA)
Chromosome and associated proteins [BR:
bsx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
C663_2152 (hupA)
DNA repair and recombination proteins [BR:
bsx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
C663_2152 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Rpf1_C
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AGE63927
LinkDB
All DBs
Position
complement(2239751..2240077)
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AA seq
108 aa
AA seq
DB search
MIINELNVSFWEEVKGMNKTELINAVAEASELSKKDATKAVDSVFDTILDALKNGDKIQL
IGFGNFEVRERSARKGRNPQTGEEIEIPASKVPAFKPGKALKDAVAGK
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgataataaacgaactgaatgtatccttttgggaggaggtgaaaggcatgaacaaaaca
gaacttatcaatgcggttgcagaagcaagcgaattgtctaaaaaagacgctacaaaagca
gttgactctgtttttgatacgatcttagatgcacttaaaaacggtgataaaatccaactg
atcggttttggtaacttcgaggtgcgtgaacgttctgcacgtaaaggacgcaaccctcaa
acaggtgaagaaatcgaaattccagcaagcaaagtacctgctttcaaaccaggtaaagcg
cttaaagacgcagttgccggaaaataa
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