Bacillus subtilis XF-1: C663_2396
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Entry
C663_2396 CDS
T02459
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase; cold shock
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bsx
Bacillus subtilis XF-1
Brite
KEGG Orthology (KO) [BR:
bsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsx03019
]
C663_2396 (cshB)
03009 Ribosome biogenesis [BR:
bsx03009
]
C663_2396 (cshB)
Enzymes [BR:
bsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C663_2396 (cshB)
Messenger RNA biogenesis [BR:
bsx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C663_2396 (cshB)
Ribosome biogenesis [BR:
bsx03009
]
Prokaryotic type
rRNA helicases
C663_2396 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AGE64162
LinkDB
All DBs
Position
complement(2446015..2447358)
Genome browser
AA seq
447 aa
AA seq
DB search
MCRFKELGKMKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTG
TGKTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIG
GTDKQKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVD
YIGSRMPEDLQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRD
KDKLLFDIMSHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQI
NDLEFTYVIATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQAMTIYEL
TDEDALVRLEKMGIEFDYLELEKGEWKKGDDRQRRKKRKKTPNEADEIAHRLVKKPKKVK
PGYKKKMSYEMEKIKKKQRRNQSKKRK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgctttaaggagctgggaaaaatgaaagaaacgaaatttgaactttatgaattg
aaaccatttattatagatgcagtacatcgccttggtttttacgaaccgactgatatccag
aaaaggctgattcctgcagtgttaaaaaaagaaagcgtcatcggccagtctcagacgggt
accggaaagactcacgcttatttactgcctttattaaacaaaatcgatcctgctaaggat
gtcgttcaggtagtcattacggctccgacaagagagctagccaaccagatttatcaggaa
gcgcttaaaatcacacaaggtgaggaaggcagtcagattcgctcgaaatgttttatcgga
ggcactgataaacaaaaatcaattgataaattgaaaatacagccgcatcttgttgtcggt
acacccggacggattgctgacttgatcaaagaacaggcgttaagtgttcataaagcggaa
tctcttgttattgatgaagcggatttaatgctggacatgggattccttgcagatgtagat
tacatcggttcccgcatgcctgaggatctgcaaatgcttgtgttctcagcgaccataccg
gaaaagctgaaaccatttttgaagaaatacatggaaaatccgaaatacgcccatgtggag
ccaaaacaggtgactgctgcgaaaatcgagcatatccttattccttcgaaacatcgtgac
aaggacaagctcctttttgacatcatgtcgcatctgaatccatacctggggattgtgttt
gccaacacgaaaaatacggctgaccatattgcccagtatctgactggcaaaggcatgaaa
atcggcttgctgcacggcggattaacaccacgtgagcggaaaaaagtcatgaagcagatc
aatgatttggaattcacttatgtcattgcaactgaccttgccgcaagaggtattgatatt
aaaggtgtcagccatgttatcaactatgagctgccggatgatctcgatttctatgttcac
cgtgtgggcagaacggctcgtgccggctcatcaggacaagcgatgaccatttatgaactt
actgatgaggatgcattagtaagacttgaaaaaatgggcatcgaatttgattacttagag
cttgaaaagggcgaatggaaaaaaggcgatgaccgtcagcgccgcaaaaagcgtaaaaaa
acgccgaatgaagcggatgaaattgctcatcgtctcgtgaaaaagcctaagaaggttaag
cctgggtataaaaagaaaatgagctatgagatggagaaaatcaagaaaaaacagagaaga
aaccaatctaagaaaagaaagtag
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