Bacillus subtilis XF-1: C663_2768
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Entry
C663_2768 CDS
T02459
Symbol
dnaE
Name
(GenBank) DNA polymerase III
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bsx
Bacillus subtilis XF-1
Pathway
bsx03030
DNA replication
bsx03430
Mismatch repair
bsx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C663_2768 (dnaE)
03430 Mismatch repair
C663_2768 (dnaE)
03440 Homologous recombination
C663_2768 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsx03032
]
C663_2768 (dnaE)
03400 DNA repair and recombination proteins [BR:
bsx03400
]
C663_2768 (dnaE)
Enzymes [BR:
bsx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C663_2768 (dnaE)
DNA replication proteins [BR:
bsx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C663_2768 (dnaE)
DNA repair and recombination proteins [BR:
bsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C663_2768 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
DUF3860-like
Motif
Other DBs
NCBI-ProteinID:
AGE64520
LinkDB
All DBs
Position
complement(2803059..2806346)
Genome browser
AA seq
1095 aa
AA seq
DB search
MEELVSEADRLGYASLALTDDHVMYGAIQFYKACKARGINPIIGLTASVFTDDSELEAYP
LVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREGIIAITPGEKGYIETLLEGGL
FEQAAQASLEFQSIFGKGAFYFSYQPFKGNQVLSEQILKLSEETGIPVTATGDVHYIRKE
DKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLVEMQNIYREHPEALQASVEIAEQCRVD
VSLGQTRLPSFPTPDGTSADDYLTDICRGGPRSRFGKPDERYLRRLQYELDVIKRMKFSD
YFLIVWDFMKHAHEKGIVTGPGRGSAAGSLVAYVLYITDVDPIKHHLLFERFLNPERVSM
PDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAKAALRDVGRVFGVSPKEADQL
AKLIPSRPGMTLDEARQQSPQLDKRLRESSLLQQVYSIARKIEGLPRHASTHAAGVVLSE
EPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLRNLTLIESITSMIEKEENIKI
DLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLKPSGLEDIVAVNALYRPGPME
NIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIMMIASRMAGFSLGEADLLRRA
VSKKKKEILDRERSHFVEGCLKKEYSVDTANEVYDLIVKFANYGFNRSHAVAYSMIGCQL
AYLKAHYPLYFMCGLLTSVIGNEDKISQYLYEAKGSGIRILPPSVNKSSFPFTVENGSVR
YSLRAIKSVGVSAVKDIYKARKEKPFEDLFDFCFRVPSKSVNRKMLEALIFSGAMDEFGQ
NRATLLASIDVALEHAELFAADDDQMGLFLDESFSIKPKYVETEELPLVDLLAFEKETLG
IYFSNHPLSAFRKQLTAHGAVSILQAQRAVKRQLSLGVLLSKIKTIRTKTGQNMAFLTLS
DETGEMEAVVFPEQFRQLSPVLREGALLFTAGKCEVRQDKIQFIMSRAELLENMDAEKAP
SVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQKQTIKLPESFHINADHQVLYR
LKELLGQKNVVLKQW
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
gtggaagagctcgtcagtgaagctgacaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcttgcaaggcgagagggatcaac
ccaataatcggtttgacggcttctgtttttacagatgacagcgagcttgaagcatacccg
ctcgtcctgctggcaaaatcaaatacaggctatcaaaacctgctgaaaatcagcagcgtt
ctgcaatctaaatcaaaaggcggactgaagccgaaatggcttcacagttatcgagaaggg
attatcgcaataacgcccggcgaaaaaggatatattgaaacgcttcttgaaggagggctg
ttcgaacaggctgctcaagcctcgctggaatttcagtctatattcggaaagggagctttt
tatttctcctatcagccttttaaagggaatcaagtcttgtctgagcagattctaaagctg
tcagaagaaacgggtatccctgttacggccacaggcgatgtgcattacataaggaaggaa
gataaggctgcctaccgttgtttgaaagcgattaaagcgggggaaaaactgacggatgca
cccgctgaagatttgcctgatctcgatttgaaaccactcgtagaaatgcaaaacatttat
cgagagcatcccgaggcactgcaagcttctgtagagatcgcggaacaatgccgggttgac
gtcagtctcgggcagacccgtctaccgtcttttccgaccccagacggaacgtccgccgat
gattatttaacggatatctgtagggggggcccccgcagccgtttcggcaagcctgatgaa
cgataccttcgccgtcttcaatatgagcttgatgtcatcaagcggatgaagttcagcgat
tactttctgatcgtgtgggattttatgaagcacgcccatgaaaaagggattgttacagga
ccgggaaggggttctgcggcaggttctcttgtggcatatgtcctgtatatcacagatgtt
gacccgattaagcatcaccttctgtttgaaagatttttaaatcccgaacgcgtcagcatg
ccggatattgatattgactttcccgatactagaagggatgaagtcattcaatatgttcag
cagaaatacggtgcaatgcacgtcgcacagattatcacctttggaacacttgcggcaaag
gcggcgctccgggacgtcggcagagtattcggcgtcagcccgaaggaggcagatcagctt
gcaaaactcattccttcaagaccgggcatgacgctggatgaagcgagacagcagtcaccg
cagctggataagcggcttcgggagtcaagcctgcttcagcaagtctattcaattgcccgg
aaaatagaagggctgccaaggcatgcatcaacccacgcagcgggcgttgtcctgagtgaa
gaaccgttaacagatgttgttccgcttcaagaagggcatgaagggatctatttaacgcaa
tacgcgatggaccatcttgaagacttgggccttttaaaaatggatttcttaggtttgagg
aacctgacacttattgaatccatcacttcaatgattgaaaaagaagaaaatattaaaata
gatctttcaagtatttcctacagcgatgacaaaacgttctccttgctgtcaaaaggggat
acgacaggcattttccagcttgaatctgcagggatgagaagcgtcttgaaacggctgaaa
ccttcaggcctagaagatattgtggcggtcaatgcactgtaccggccgggtccgatggaa
aatattccgttatttatcgaccgtaaacacggccgggcgcctgttcactatcctcatgaa
gatttaaggagcattttggaagatacatatggcgtcattgtgtatcaggaacaaattatg
atgattgcttcccgtatggcggggttttctttaggcgaagcggacctattgagaagggcg
gtcagcaaaaagaaaaaagaaatcctggacagagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaggtctacgatttaatcgtcaaattc
gcaaactatggctttaaccgaagccatgcggtggcatacagcatgatcgggtgccagctt
gcgtatttgaaagctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatctctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaataaaagcagttttccgtttacagttgaaaacggatctgtcaga
tacagcctccgcgcgataaaaagtgtaggcgtctcagcagtcaaagatatatataaagca
agaaaagagaaaccatttgaagatcttttcgatttctgctttcgggtgccgtcaaaaagc
gtaaatcgcaaaatgcttgaagcacttatcttttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgatgttgctttggaacatgctgagctattcgcc
gcggacgatgaccaaatgggattgtttttagatgaatcgttttcaattaagccgaagtat
gtggaaacggaagagcttccgctagtggatttacttgcatttgaaaaggaaacgctcggc
atttatttttcaaatcatccgctctccgccttccgaaaacagctcactgcgcatggagca
gtctccattctgcaggctcagcgggcagtcaaaaggcagctttcactaggcgttctgctg
tcgaagatcaaaacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gatgaaaccggcgagatggaagccgtagtcttccctgaacaattcagacagctttcaccc
gttttaagagaaggcgctcttttgttcacagcggggaaatgcgaagtaagacaagataag
attcaattcatcatgtcccgggcagaattattagaaaatatggatgcagaaaaagcgcca
tcggtttatataaaaatagaaagcagtcagcacagccaggagatcctggcaaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaggcaaaaa
cagacgattaagctacctgagtcgttccatatcaatgcagatcaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa
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integrated database retrieval system
