Bacillus subtilis XF-1: C663_3214
Help
Entry
C663_3214 CDS
T02459
Symbol
helD
Name
(GenBank) DNA 3'-5' helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsx
Bacillus subtilis XF-1
Pathway
bsx03420
Nucleotide excision repair
bsx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C663_3214 (helD)
03430 Mismatch repair
C663_3214 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsx03400
]
C663_3214 (helD)
Enzymes [BR:
bsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C663_3214 (helD)
DNA repair and recombination proteins [BR:
bsx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C663_3214 (helD)
MMR (mismatch excision repair)
Other MMR factors
C663_3214 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
Viral_helicase1
PhoH
SLFN-g3_helicase
AAA_16
DEAD
NACHT
NPHP3_N
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGE64949
LinkDB
All DBs
Position
complement(3246810..3249167)
Genome browser
AA seq
785 aa
AA seq
DB search
MFVNYFLEVPFMNQQDKEWKEEQSRIDEVLQELEKKERFLETSAGGLKHDIIGLRKSFWE
DVKVNFDDAHEAIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKSPYFGRIDFIEN
GEEQAERIYIGLASCLDEKEEHYLIYDWRAPISSLYYNYSPGKAEYEVPGETIEGEMVLK
RQFMIKNGTLKAMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQNQIIRNEKSKIL
IVQGAAGSGKTSAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSSVLPELGEENME
QATFQEYIEHRLGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAGLSFQQFINEYV
TRLSSDGMIFKNIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKWLLSELNKLEKK
ERRKDWVVHEAELLDKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAAIIVKKAFKPLK
QAVRLLAFLDVSQLYLQLFSGWGGKFQHEKMAAIGELTRSAFTDNKLLYEDAAPFLYMQD
LIEGRKKNTKIKHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSIYAHTIHGDQRM
DACFEDEPAEYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRTGEMPLVFKTEGHESLC
QKLAQEIGRLKKKGHETIAVICKAAQQCIQAHAHMSEYTDVRLIHKENQPFQKGVCVIPV
YLAKGIEFDAVLVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGAASPFVTAVPSRL
YQNAE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcaactattttctggaggtgccgttcatgaatcagcaggataaggaatggaag
gaagagcagtcgagaatagatgaggtgctgcaggagctcgaaaaaaaagagcggtttctg
gaaacgtctgcgggcgggttgaagcatgatatcatcggattaagaaaaagcttttgggag
gatgttaaggttaattttgatgatgcccatgaagcgattgaaacgatggcaagcattaag
cagcaggcagagctgctgtctgatcgggaacacaatcatcggcgcatggatcagcagctc
aaacgaattcatcaattaaaaaaatcgccttatttcggccggattgattttattgaaaac
ggcgaggagcaggcagagcgaatttatatcggtttagcttcctgtttggatgagaaggag
gaacactatctgatttatgactggagggcgccgatatcaagtttgtactacaattattcc
ccaggtaaagcggagtacgaggtgcccggtgaaacgatagaaggggaaatggtgctgaaa
cgccagtttatgatcaaaaacggcactctcaaggcgatgtttaataccgatatgacgatt
ggtgatgaaatgctgcaagaggtattaagccatcactccgatacccaaatgaaaaacatc
gtgtctacgattcagaaagaacaaaatcagattatccgtaatgaaaaaagcaagatcctg
atcgtgcagggagcggctggcagcgggaaaacatcggctgcgcttcagcgtgtcgcttat
ttgttatacaggcaccgtggcgtcattgatgccggacaaatcgttttgttttctcccaac
ttcttatttaacagctatgtctcctctgttttgccggagttaggagaagagaatatggag
caggcgacgtttcaggaatatatcgagcatcgtcttggccgcaagttcaaatgtgaaagc
ccctttgatcagctcgaatattgcctgaccgaaacaaagggaggcgattttccaacaagg
cttgcgggaatcacatggaaggcgggtttatcctttcagcaattcattaatgaatacgtc
acacggctttcctctgacgggatgatttttaaaaatattatattccgcggacaaaagctg
atcacaaaggagcaaattcaatcctatttttactcattggatcaaaatcactccattccg
aatcggatggagcaaaccgcgaagtggctgctgagtgagcttaacaagcttgagaaaaag
gaacggcgaaaggattgggtcgttcatgaagctgagctgcttgacaaagaggactacctg
gacgtgtacaaaaaactgcaagaaaggaaacggttcagcgagagtacgtttaacgattat
caaagagagcagcagctgcttgccgccatcattgtgaaaaaagctttcaaaccgctcaag
caggcagtcaggctccttgcatttcttgatgtttcacagctgtatttgcaattgttttct
ggctggggagggaaatttcagcatgagaagatggccgcgataggtgagctgacccgttcg
gcatttacggataataaattgctctatgaggacgcggcaccgtttctttatatgcaggat
ctgattgagggcagaaagaaaaatacgaagatcaaacatctatttattgacgaagcccag
gactattcaccgtttcagatggcttacatgagaagcatttttccggctgccagcatgaca
gtgctcggtgatatcaatcagtccatctacgcgcataccatacacggggatcagcgtatg
gatgcgtgctttgaggatgagcctgctgagtatgttcgtttaaagagaacatacagatca
acaaggcagattgtcgagtttaccaaagcgatgcttcaagatggagcggatattgagccg
tttaatagaaccggggaaatgccgctcgttttcaaaactgaaggacatgagagcctttgc
caaaagctcgcgcaagaaattggacggctcaagaaaaaagggcacgaaacaatagccgtc
atctgcaaggctgcgcagcaatgcatacaggcgcacgcccacatgagtgaatatacagat
gttcgcctgattcataaagaaaatcaaccattccaaaagggtgtttgcgtgattccggtg
tatttagcgaagggaattgaatttgacgcagtgcttgtctatgatgcatctgaagaacac
tatcatacagagcacgaccgcaggcttttatatactgcgtgcacccgtgcgatgcacatg
ctggcggtattttatacaggtgcagccagtccgtttgtaacagctgtgccgtctcgctta
tatcagaatgctgaatga
DBGET
integrated database retrieval system
