Bacillus subtilis subsp. subtilis BAB-1: I653_08465
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Entry
I653_08465 CDS
T02520
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
bsy
Bacillus subtilis subsp. subtilis BAB-1
Pathway
bsy02020
Two-component system
bsy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I653_08465
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I653_08465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsy03021
]
I653_08465
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bsy02035
]
I653_08465
Transcription machinery [BR:
bsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I653_08465
Bacterial motility proteins [BR:
bsy02035
]
Flagellar system
Flagellar assembly proteins
Stator
I653_08465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
IF2_N
UPF0175
DUF7096
Motif
Other DBs
NCBI-ProteinID:
AGI28949
LinkDB
All DBs
Position
1675770..1676534
Genome browser
AA seq
254 aa
AA seq
DB search
MQSLNYEDQVLWTRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSVHKDDLMSLGM
LGLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRTSREKTKKVEAAIEKLEQ
RYLRNVSPAEIAEELGMTVQDVVSTMNEGFFANLLSIDEKLHDQDDGENIQVMIRDDKNV
PPEEKIMKDELIAQLAEKIHELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSK
ALFKLKNLLEKVIQ
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccttgaattatgaagatcaggtgctttggacgcgctggaaagagtggaaagat
cctaaagccggtgacgacttaatgcgccgttacatgccgcttgtcacatatcatgtaggc
agaatttctgtcgggctgccgaaatcagtgcataaagacgatcttatgagccttggtatg
cttggtttatatgatgcccttgaaaaatttgaccccagccgggacttaaaatttgatacc
tacgcctcgtttagaattcgcggcgcaatcatagacgggcttcgtaaagaagattggctg
cccagaacctcacgcgaaaaaacaaagaaggttgaagcggcaattgaaaagcttgaacag
cggtatcttcggaatgtatcgcccgcggaaattgcagaggaactcggaatgacggtacag
gatgtcgtgtcaacaatgaatgaaggtttttttgcaaatctgctgtcaattgatgaaaag
ctccatgatcaagatgacggggaaaacattcaagtcatgatcagagatgacaaaaatgtt
ccgcctgaagaaaagattatgaaggatgaactgattgcacagcttgcggaaaaaattcac
gaactctctgaaaaagaacagctggttgtcagtttgttctacaaagaggagttgacactg
acagaaatcggacaagtattaaatctttctacgtcccgcatatctcagatccattcaaag
gcattatttaaattaaagaatctgctggaaaaagtgatacaataa
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