Bacillus subtilis subsp. subtilis BAB-1: I653_09940
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Entry
I653_09940 CDS
T02520
Name
(GenBank) putative ATP-dependent nucleic acid helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsy
Bacillus subtilis subsp. subtilis BAB-1
Pathway
bsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I653_09940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsy03019
]
I653_09940
03400 DNA repair and recombination proteins [BR:
bsy03400
]
I653_09940
Enzymes [BR:
bsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I653_09940
Messenger RNA biogenesis [BR:
bsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I653_09940
DNA repair and recombination proteins [BR:
bsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I653_09940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AGI29237
LinkDB
All DBs
Position
complement(2044193..2045968)
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AA seq
591 aa
AA seq
DB search
MLHRAQSLLAHYFGYEKFRNGQDEAIRLVTEARQNTACIMPTGGGKSICYQIPALMFEGT
TIVISPLISLMKDQVDALEEAGINAAYINSTQSNQEIYERLNGLKEGAYKLFYITPERLT
STEFIRILQGIVVPLVAIDEAHCISQWGHDFRPSYRNIEILFRELHDKPVIMALTATATP
EVHDDICKQLHIQKENTVYTGFSRDNLTFKVVKGENKDRFIDEYVQNNRHEAGIVYTATR
KEADRIYERLKRNQVRAGRYHGGLADDVRKEQQERFLNDELQVMVATSAFGMGIDKSNIR
FVLHAQIPKDMESYYQEAGRAGRDGLASECVLLFSPQDIMVQRFLIEQSEHEEKQKQDLK
KLRQMVDYCHTEDCLQRFILMYFGEKEPDACGHCGNCTDTRAAHDVTREAQMVLSCIIRM
KERFGKTMVAQVLAGSKNKKVLENGFSDLSTYGILKHQSVGEISDFIEFLISDDFIRMSD
GTFPTLFVSSKGRNVLKGELSVARKEALKAAAITENDELFERLRMVRKEIAAEQGVPPFV
VFSDQTLKEMSGKQPVNDDELLSIKGVGEQKRAKYGRLFLQEIQAYARMTD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttacatagagcccaatcccttctggctcattattttggttatgagaagtttcggaac
ggccaagatgaagcgatccgcttggtgacggaagcgaggcaaaatacggcctgcattatg
ccgacgggaggcggcaaatcgatttgctatcaaattccggcattaatgtttgaagggacg
acgatcgtcatttcaccgttgatttccttgatgaaggatcaagttgatgcgttagaagaa
gcgggaattaacgccgcctacattaacagcacacaatccaatcaggaaatatatgagagg
ctgaacggactcaaagaaggggcttataagcttttttacattacaccagagcgactaacg
tccacagagtttatccggattttgcagggtatagttgttcctttggtcgcaatagacgag
gcgcactgtatttctcaatggggccatgattttaggccaagctacaggaatattgaaatc
ttgttccgtgaattacacgacaagcctgtcatcatggcgttaacagcaacagccacaccc
gaggttcatgatgatatttgcaaacagctgcatattcaaaaagaaaacacggtatatacc
ggattttccagagataatttaacctttaaagtagtaaaaggagaaaataaagatcggttt
atagacgaatatgtgcaaaacaacaggcatgaagcaggaattgtctatacagcgaccaga
aaagaagctgatcggatatatgagagattgaaacgaaatcaggtcagggcaggccggtat
catggaggtttggctgatgatgtgagaaaagagcagcaggaaaggtttcttaatgatgag
cttcaagttatggtggcaacctctgcttttggaatgggtattgataaatcaaatatcaga
tttgttctgcatgcacaaattccgaaagatatggaaagctattatcaagaggcaggacga
gctggacgggacggtcttgccagtgaatgtgttctcctgttttcaccgcaggatattatg
gtgcagcgcttcttaattgagcaatcagaacatgaagagaaacaaaagcaggatttaaaa
aagctgagacaaatggtcgactactgtcatacggaagattgtctgcagcgttttatcctt
atgtatttcggagaaaaggagcctgatgcgtgcggacattgcggaaactgtaccgataca
agagcggcccatgacgtgacgcgggaggcgcaaatggtcttatcttgtatcattcgcatg
aaagaacggtttggcaagacgatggttgcccaggtgcttgccggctccaaaaataaaaaa
gttcttgaaaatggcttttccgacctttcaacatacgggatattaaaacaccaatccgtt
ggcgaaatcagtgattttatcgaatttcttatttctgacgacttcatcaggatgtcagac
ggaacgtttccgactctttttgtcagcagtaaaggaaggaatgtgctgaaaggagaatta
tcagtagcgagaaaagaagcgttaaaagcggcagcgattactgaaaatgacgagctattt
gaacgattgcgcatggttcggaaagaaattgcggctgagcagggtgttccgccatttgtt
gttttctctgaccaaacgttaaaagaaatgtcaggaaaacaacccgtaaatgatgatgaa
cttttgtctataaaaggagtcggagaacaaaaaagagcaaaatacggccggcttttttta
caagaaatacaagcttatgcaaggatgacagactaa
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