Bacillus subtilis subsp. subtilis BAB-1: I653_12085
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Entry
I653_12085 CDS
T02520
Name
(GenBank) ATP-dependent RNA helicase; cold shock
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bsy
Bacillus subtilis subsp. subtilis BAB-1
Brite
KEGG Orthology (KO) [BR:
bsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsy03019
]
I653_12085
03009 Ribosome biogenesis [BR:
bsy03009
]
I653_12085
Enzymes [BR:
bsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I653_12085
Messenger RNA biogenesis [BR:
bsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I653_12085
Ribosome biogenesis [BR:
bsy03009
]
Prokaryotic type
rRNA helicases
I653_12085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AGI29666
LinkDB
All DBs
Position
complement(2409158..2410474)
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AA seq
438 aa
AA seq
DB search
MKETKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLL
PLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSID
KLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPED
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLFDIM
SHLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRL
EKMGIEFDYLELEKGEWKKGDDRQRRKKRKKTPNEADEIAHRLVKKPKKVKPGYKKKMSY
EMEKIKKKQRRNQSKKRK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacgaaatttgaactttatgaattgaaaccatttattatagatgcagtacat
cgccttggtttttacgaaccgactgatatccagaaaaggctgattcctgcagtgttaaaa
aaagaaagcgtcatcggccagtctcagacgggtaccggaaagactcacgcttatttactg
cctttattaaacaaaatcgatcctgctaaggatgtcgttcaggtagtcattacggctccg
acaagagagctagccaaccagatttatcaggaagcgcttaaaatcacacaaggtgaggaa
ggcagtcagattcgctcgaaatgttttatcggaggcactgataaacaaaaatcaattgat
aaattgaaaatacagccgcatcttgttgtcggtacacccggacggattgctgacttgatc
aaagaacaggcgttaagtgttcataaagcggaatctcttgttattgatgaagcggattta
atgctggacatgggattccttgcagatgtagattacatcggttcccgcatgcctgaggat
ctgcaaatgcttgtgttctcagcgaccataccggaaaagctgaaaccatttttgaagaaa
tacatggaaaatccgaaatacgcccatgtggagccaaaacaggtgactgctgcgaaaatc
gagcatatccttattccttcgaaacatcgtgacaaggacaagctcctttttgacatcatg
tcgcatctgaatccatacctggggattgtgtttgccaacacgaaaaatacggctgaccat
attgcccagtatctgactggcaaaggcatgaaaatcggcttgctgcacggcggattaaca
ccacgtgagcggaaaaaagtcatgaagcagatcaatgatttggaattcacttatgtcatt
gcaactgaccttgccgcaagaggtattgatattaaaggtgtcagccatgttatcaactat
gagctgccggatgatctcgatttctatgttcaccgtgtgggcagaacggctcgtgccggc
tcatcaggacaagcgatgaccatttatgaacttactgatgaggatgcattagtaagactt
gaaaaaatgggcatcgaatttgattacttagagcttgaaaagggcgaatggaaaaaaggc
gatgaccgtcagcgccgcaaaaagcgtaaaaaaacgccgaatgaagcggatgaaattgct
catcgtctcgtgaaaaagcctaagaaggttaagcctgggtataaaaagaaaatgagctat
gagatggagaaaatcaagaaaaaacagagaagaaaccaatctaagaaaagaaagtag
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