Bradyrhizobium symbiodeficiens: CIT39_00400
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Entry
CIT39_00400 CDS
T06284
Name
(GenBank) carbohydrate porin
KO
K16080
high affinity Mn2+ porin
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_00400
Transporters [BR:
bsym02000
]
Other transporters
Pores ion channels [TC:
1
]
CIT39_00400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
OMP_b-brl
OMP_b-brl_2
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
AWM05072
LinkDB
All DBs
Position
complement(731650..733677)
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AA seq
675 aa
AA seq
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MGYIRVLGACVLTLRGHRYQYLRTAAAIASGVLAFPAAGRAADLPLKAPALKAVYDWTGL
YIGGHVGVTRGTSSATLADPTLATDNNVFTGATGGVQAGYNWRLNSGLLLGVEGDISFPN
YMPSNHVVSSAATALSGAEERWDYVASLRARLGYATGNWLLYATGGAAFTGERFLSTPTG
GAEERVLHTRFGWTAGGGVEYAFAPHWTTRLEYLYSRFENASVTFPSGGQYSSSMDFHSL
RIGLNRKIDWPGVPTYNPRSDVTDTESSRWEIHGQSTVLGQGYPAFRAPYTGPNSLLPSP
DFQQTWSNSLYLNARLWDGGEVYFNPELLQGFGFNNTTGAAGFPNGEAQKSGFPYPHFNA
SRLFVRHTFGFGGEQEELASGQLQLASKVDVSRLTLQVGKFSVVDVFDGNSYAHDPRKDF
MNWSIWASGAFDYAADKLGLGYGATAELNQKQWAIRGGYFLMDAVSNSSNFDMNIGRRGE
YVAELELRYSLFGQPGKLRTLGFVNSAFSGSYRETLDNPAFGVDISQTRRGRIKYGYALN
LEQAITDDIGVFGRWSWNNGRTEIMAFTDIDRSLSGGVSVKGAKWGRPDDVVAIAGAINA
LSQDHRDFIAAGGLGPLIGDGQLNYRRERVLETYYAYALNKALTFTADYQLIVNPAYNAD
RGPVSVFSGRLHGEF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggatacattcgtgttttgggggcgtgcgttttgacgttgagaggtcaccgttaccag
tacttgcggacggccgcggcgattgcctcgggcgtgctggcttttcccgccgcaggccgc
gcggctgatctgccgctgaaggcgccggcgctgaaggcggtctatgactggaccggcctc
tatatcggcgggcatgtcggcgtcacccgcggcacctcgtcggcgacgttggccgatccc
acgctcgcaaccgacaacaacgtcttcaccggcgcgactggcggcgtccaggccggctac
aattggcgtctcaattcgggcctgctgctcggcgtcgaaggcgacatctcgtttccgaac
tatatgccttccaaccacgtcgtgtcgtcggcggcgaccgcgctgtcgggcgcggaggaa
cgctgggactatgtcgcgagcctgcgcgcgcggctcggttacgccaccggcaactggctg
ctctatgccacaggcggcgcggccttcacgggcgagcgctttctgtcgacgccgacgggt
ggcgctgaagaaagggtgctgcacacgcggttcggctggaccgccggcggcggcgtcgaa
tacgccttcgcgccgcattggaccacacggctcgaatatctctacagcaggttcgagaac
gccagcgtcacctttccctccggcgggcaatattcgtcgtcgatggactttcacagcttg
cggatcggcctcaatcgcaagatcgattggccgggcgtgccgacttacaatccgaggtcc
gacgtcacggacaccgagtcgagccgctgggagatccacggccagtcgaccgtgctgggg
cagggctaccccgcgttccgcgcgccctataccggaccgaacagcctgctcccgtcgccg
gatttccagcagacctggagcaattcgctctatctcaacgcgcggctttgggacggcggc
gaggtctatttcaatcccgagctgttgcagggtttcggcttcaacaacacgacgggcgct
gcaggctttcccaacggcgaagcgcagaagtccggcttcccctatccgcatttcaatgcc
tcccggctgttcgtacgccacaccttcggcttcggcggcgagcaggaagagcttgccagc
ggccagcttcagctcgcgagcaaggttgacgtctcgcgcctgaccttgcaggtcggcaaa
ttctccgtggtcgacgtgttcgacggcaattcctatgcgcacgatccgcgcaaggatttc
atgaactggtcgatctgggcgtccggcgccttcgactatgccgccgacaagctcggcctc
ggttacggggccacagccgagttgaaccagaagcaatgggcgatacgcggcggctacttc
ctgatggacgccgtatccaactcgagcaatttcgacatgaatatcggccgccgcggcgaa
tatgtcgcagagcttgagctgcgctattcgctgttcggtcagcccggcaagctgcgcacg
ctcgggttcgtcaacagtgcgttctccggcagctatcgcgagacgctggacaatcccgcc
ttcggcgtcgacatcagccagacccgtcgcggccggatcaaatacggctacgccctcaac
ctcgaacaggccatcaccgacgatatcggcgtgttcggccgctggagctggaacaacggc
cgaaccgagatcatggcgttcaccgacatcgatcgcagtctgtccggcggcgtctccgtc
aagggagcgaaatggggtcggcccgacgacgtcgtcgccatcgccggcgccatcaacgcg
ctgtcgcaggaccatcgcgacttcattgcagccggcggactcggtccgctgatcggcgac
ggccagctcaactaccgccgcgagcgcgtgctggagacctactacgcctatgcgctgaac
aaggcgctgaccttcaccgccgactaccagctcatcgtcaaccccgcctacaacgccgac
cgcggaccggtgtcggtgttttcggggcgtctgcacggcgagttctga
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