Bradyrhizobium symbiodeficiens: CIT39_00905
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Entry
CIT39_00905 CDS
T06284
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIT39_00905
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_00905
Transporters [BR:
bsym02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CIT39_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_16
AAA
Mg_chelatase
AAA_5
AAA_29
nSTAND1
NACHT
DUF3987
nSTAND3
RsgA_GTPase
AAA_19
AAA_7
PRK
Zeta_toxin
FtsK_SpoIIIE
PhoU
Motif
Other DBs
NCBI-ProteinID:
AWM05159
LinkDB
All DBs
Position
complement(842687..844306)
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AA seq
539 aa
AA seq
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MTAPPAVSIKNLRIALPEGAERPFAVDGVSLDLRPGKIVCVVGESGSGKSMCAHALMGLL
PDTVSIASGEIQFEGRDLLKLDDDGWRDLRGRRFAMIFQEPMTALNPLMRIGDQMAEMFE
AHGLLTPRERRAKALALAREVGLPDPERIVRAYPHQLSGGQRQRAMIAMALALEPAVLVA
DEPTTALDVTTQAQILKLIRNLQQSRNMAVMFITHDFGVVADIADQVVVLRHGKVVEEGP
AATVFNAPQHDYTKALLAAVPSMDPPARAPLDDRARAVEVIGLDKTYVTSGGWFREDRRV
DAARAVNFNILKGETLGLVGESGSGKSSVARLVMRLIEADRGTVWIGDTELTSLSGKALR
AERHRIQMIFQDPFASLNPRRKVGHIIADGPIAAGTDPKVAFDRARDLLKMVGLDAGALE
RYPHEFSGGQRQRIGIARALALEPEIIVADEAVSALDVSVQAQVLRLLEDLKARLGLSML
FITHDLRVAAQICDRIAVMQRGAVVELKPTAQLFASPEHAYTRELLAAVPGRKERALAD
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctccgcccgccgtctccatcaagaacctgcggatcgcgctgcctgagggcgcc
gagcgtccatttgccgtcgacggcgtctcgctcgatttgcggcccggcaagatcgtctgc
gtcgtcggcgagtccggctccggcaagtcgatgtgcgcgcatgcgctgatgggcctgctg
cccgacacggtgtccatcgcctccggcgagatccagttcgagggccgcgacctgctcaag
ctcgacgacgacggctggcgcgatctgcgcggccgccgtttcgcgatgatcttccaggag
ccgatgaccgcgctcaatccgttgatgcggatcggcgaccagatggcggagatgttcgag
gcccatggcctgctgaccccgagggagcggcgcgccaaggcgctggcgctggcgcgggag
gtcgggctgcccgaccccgaaagaatcgtgcgcgcctatccgcaccagctctccggcggc
cagcgccagcgcgccatgatcgcgatggcgctcgcgctcgagccggccgtgctggtcgcg
gacgagccgaccaccgcgctcgacgtcaccacgcaggcgcagatcctcaagctgatccgc
aatctccagcagagccgcaacatggcggtgatgttcatcacccacgatttcggcgtggtc
gccgacatcgccgaccaggtcgtggtgctccgccacggcaaggttgtggaggaaggcccg
gccgcaacggtgttcaacgcgccacagcacgactacaccaaggcgctgctcgctgccgtg
ccgtcgatggacccgccggcgcgcgcgccgctcgacgacagggccagggcggtcgaggtg
atcgggctcgacaagacctatgtcacctcgggcggctggtttcgcgaggatcgccgcgtc
gatgccgcgcgcgcggtcaatttcaacatcctcaagggcgagacgctcggcctggtcggc
gaatccggctcgggcaaatcgtcggtggcgcggctggtgatgcggctgatcgaggccgac
cgcggcacggtgtggatcggcgacaccgaactcacctcgctctcgggcaaggcgctgcgc
gccgagcgccatcgcatccagatgatctttcaggatccgttcgcctcgctcaatccgcgc
cgcaaggtcggtcacatcatcgccgacggtccgatcgcggccggcaccgacccgaaggtc
gccttcgaccgcgcccgcgatctgctcaagatggtcggcctcgatgccggcgcgctcgag
cgctatccgcacgagttctccggcggccagcgtcagcgcatcggcattgcgcgcgcgctc
gcgctcgagcccgagatcatcgtcgcggacgaagccgtctccgccctcgacgtctccgtg
caggcgcaggtcttgcggttgctcgaagatctcaaggcgcgactcggcctctcgatgctg
ttcatcactcacgaccttcgcgtcgccgcccagatctgcgaccgtatcgcggtgatgcag
cgcggcgccgtcgtcgagctgaagccgaccgcacagctgttcgcatcgcccgagcatgcc
tatacgcgcgaactgctggcggcggtgccgggacggaaagagcgcgcgctggccgactga
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