Bradyrhizobium symbiodeficiens: CIT39_02340
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Entry
CIT39_02340 CDS
T06284
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsym03009
]
CIT39_02340
Enzymes [BR:
bsym01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CIT39_02340
Ribosome biogenesis [BR:
bsym03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CIT39_02340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AWM05407
LinkDB
All DBs
Position
1138346..1140454
Genome browser
AA seq
702 aa
AA seq
DB search
MPRDSDKDNDSRGRRGPARGGPHKGPPKGRSGKPRGPDKKFAKRGPEGRSDARPPRGDRD
SRPFRPRADGDAPRRDFSERPKFNRDDRPREDRAERSFKPRGDRPFSDRSSRDGEKRPFK
PRGDRPSFGRDDRPPRRDRDDSRPAGRTGDRKFGDKKPYAPRGDRPERKFDGERKFSRGA
PDRGPREDRGERSFKPRGDRPNFDRGDRAPRGDRPERKFDGERKFSRGAPDRDRGPRKDF
GGRDRGGDKPWQKREGGDDRPRFSRSRDDRPSGDRPFRERPKFDRPRDDRPKFDRPRGDG
ERGGDRPKFNRPRERSEGRSDWHEHPRNEGRFGDRPRRENEDESRIFEKRPAFGGRGAYR
ERDRDSDRRPRREEEPKPKKAGERIAKALARAGLASRRDAEEMVTQGRVTVNGRVINSPA
LDITRNDVVLVDGKPLPERERTRLFLYHKPRGLMTTHDDPEGRPTVFDNLPEGLPRLISV
GRLDFNTEGLLLLTNDGGLARTLELPDTGWLRRYRVRAHGDVTQAQLDELKDGVEIEGVK
YGPIDATLERDQGANVWLVFAIREGKNREVRNVCAHLGLEVNRLIRVSYGPFQLGEVPEG
EVEEIKSRVLRDQLGDKIIEKSGAQFDVPQKSSSQEGETPREKKPASKRDVIADRKGRRV
LVQRTGSEEARERNEAEASGYGPPRRPKRGYHGKRDLSPKED
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgatagcgacaaagacaacgattcccgcggccggcgaggcccggcaagggga
ggtccgcacaagggaccgccgaagggccggtccggcaagccgcgcggcccggacaagaag
ttcgccaagcgcggccccgagggcaggagcgacgcccgcccaccccgtggcgaccgcgac
agccgtccgttccgcccccgcgcggacggcgatgccccgcgccgcgacttcagcgagcgg
ccgaaattcaatcgcgacgaccggccccgggaagatcgcgccgagcgcagcttcaagccg
cgtggcgaccggcctttctccgatcgctcctcgcgcgatggcgagaagcgcccgttcaag
ccgcgtggtgatcgcccgtcctttggccgcgacgaccgtccgccgcgccgggatcgcgac
gattcccgccccgccggccggaccggtgacagaaagtttggcgacaagaagccctacgcc
ccgcggggcgatcgtccggaacgcaagttcgacggcgagcggaaattctcgcgcggcgca
cccgaccgcggaccgcgcgaggatcgtggcgagcgcagcttcaagccgcgcggagaccgc
ccgaatttcgatcgcggtgatcgtgcgccacgcggcgaccgtcctgagcgcaagttcgac
ggcgagcgaaagttttcgcgaggcgcaccggatcgcgatcgcgggccgcgcaaggatttc
ggcggtcgtgaccgcggcggggacaagccctggcagaagcgcgaaggcggcgatgaccgt
ccccggttctcgcgttcgcgcgatgatcgtccgtcgggcgatcgtccgttccgcgagcgg
ccgaaattcgatcgtccccgcgacgaccgtcccaaattcgatcggccccgtggcgacggc
gaacgcggcggtgatcgcccgaaattcaaccggccgcgcgagcgctccgaggggcgctcc
gactggcacgagcatccgcgcaacgagggccgttttggcgatcgtccgcgccgtgaaaac
gaggacgagagccggatcttcgagaagcgccccgccttcggcggccgcggcgcctatcgc
gagcgcgatcgtgactccgatcgccgcccgcgccgggaggaagagccgaagccgaagaag
gccggcgagcgcatcgccaaggcgctggcccgcgcggggcttgcctcgcgccgcgatgcc
gaggagatggtcacgcagggccgtgtcaccgtcaacggccgcgtcatcaactcgcctgcg
ctcgacatcaccaggaacgacgtcgttctggtcgacggcaagccgttgccggagcgcgag
cgcacgcggctgttcctctatcacaagccgcgcgggctgatgaccacgcatgacgacccc
gagggtcgtccgaccgtgttcgacaatctgcccgaaggcctgccgcggctgatcagcgtc
ggccggctcgatttcaacaccgaaggcctgctgctgctcaccaacgacggcgggctggcg
cgcacgctcgaactgccggacaccggctggctgcgccgctaccgcgttcgcgcccatggc
gacgtcacccaggcgcagctcgacgagctcaaggacggcgtcgagatcgagggcgtcaaa
tacggcccgatcgacgcgacgctggagcgcgaccagggcgccaatgtctggctggtgttc
gcgatccgcgaaggcaagaaccgcgaggtgcgcaatgtctgcgcgcatctcgggctcgag
gtgaaccggctgatccgtgtttcctacggcccgttccagctcggcgaagttcccgaaggc
gaggtcgaggagatcaagtcgcgcgtgctgcgcgaccagctcggcgacaagatcatcgag
aagtcgggcgcgcagttcgacgtgccgcagaaatcttcttcacaagagggcgaaacgccg
cgcgagaagaagcccgccagcaagcgtgacgtgatcgctgaccgcaagggccgccgcgtg
ctggtgcagcgcaccggcagcgaggaggcgcgcgagcgcaacgaggccgaggccagcggc
tacggcccgccgcgccgtcccaagcgcggctatcacggcaagcgcgacctgtcgccgaag
gaggactga
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