Bradyrhizobium symbiodeficiens: CIT39_02865
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Entry
CIT39_02865 CDS
T06284
Name
(GenBank) PAS domain S-box protein
Organism
bsym
Bradyrhizobium symbiodeficiens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_8
HisKA
PAS
PAS_9
PAS_4
HATPase_c
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AWM05505
UniProt:
A0A2U8Q849
LinkDB
All DBs
Position
complement(587957..591427)
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AA seq
1156 aa
AA seq
DB search
MRETKAGRMTSSDFQLRGVGDPRLAVHATSPLATWLWSIDGTRVLWANPVGARLFGAANG
SVLAERTLGPADGHRRQIARLARQLPANGTVRLERLRGFGARLGTLMTCACARIDFADGG
HAVLVTAMDPALRTMPLVERLHRLVEGAKTPMAAFAPDGLFVGASAAARALLGFRDLGEA
GLEQARSDALRDGRAETPIGIGQMVLQRVGRGADVGLVALIEPAAQAAPEAAVPESTPEV
AASNVPVEPAPQTEEMPSEPPPSHDAQAGIALFDAFAEPVETIAAAALPQGEAAAEIATD
EQAAADLVEETVPEPEPDAHEQSADVAPKTPVENPHQAIVSPQAAPITSGMVEPSSGRET
SGHEPPAPRQHPLRFLWQLDAESRFVLLSDEFIHLIGARTASAFGRPWHDIAGQLSLDPD
GRVAEALASHDTWAGITVNWPADGDEHLPVELAGLPVYDSSRNFAGFKGFGVCRDLDGLN
RLEALRRFELVAEPPAQHALPAEPVAPEAEPLAEAPPPPIEPPASEPEPTPEPELPEPTS
DANSHSTDPDRQVETPVETPPNVVPFRQHGDVRSLNDQRSPTLTPVENSAFNELARQLSE
RLERERETIATEASEPVVEITTEPPAPEPEPQHTAAEWLTEPAPPPRGASARDRTLLDLL
PTGILIYRLDRLLYANPAFLARMGYAGLSALEDAGGLDALYVEPGVSLASSTSQAGTPVT
ISATLATGEQPLATTEAHLHTIDWDGESAHALICALPQASPVIAETIVAESVVAESFPYA
PELDSTAGEAEAEDLAAILDTTAEGIVMFDAEGNVYACNRSAEALFGYDGEALLQQNLVT
LFAPESQQIVVDYLESMKSQDIASLLDHGREVLGREKKGGVIPLAMIMGRTRPDGPNFFA
VFRDLSQSKKGENELTQARHLVHSAANAKADMLARISHEIRTPLNAIIGFAEVMISERFG
TLGNERYGEYMKDIRASGERVIAIIDDLLELSRIETGKLDLNFANLNLNDLVEACVTVMQ
PQANRERIIIRTSLAHALPQVTADARAMRQITMNLISNSIRLASAGGQVIVSTALSDRGE
IALRIRDTGHGLSEREVAAAMEPFRTPPPGDAADSAALSLSLTKALVEANRARFNIKSAG
NGTLIEVVFAPVVAGA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagaccaaagccggtcggatgacgagttcggatttccagttgcgaggtgtgggc
gatccccggctggccgtgcatgcgacctcgccgctcgcgacctggctgtggtcgatcgac
gggacgcgggtgctgtgggccaatccggtcggcgcaagactgttcggtgcagcgaatggc
tcggtgctggcggagcggactcttggcccggcagacggccatcgccgccagatcgcccgg
ctcgcccggcagctgccggccaacggcacagtgcggctggaacgtctgcgcggcttcggc
gcccggctcggcacgctgatgacttgcgcctgcgcccggatcgactttgccgatggtgga
cacgcggtgctcgtcaccgcgatggacccggccttgcgcaccatgccgctggtcgagcgg
ctgcatcgcctggtcgagggcgcgaagacgccgatggcagcgttcgcgcccgacggcctg
ttcgtcggcgccagcgctgccgcccgcgccctgctcggctttcgcgatctcggcgaagcg
ggcctcgaacaggcgcgcagcgatgcgcttcgcgacggccgcgccgaaacgccgatcggc
atcggccaaatggtgctgcagcgggtcggccgaggggccgatgtcgggctggttgcgctg
atcgagcctgccgcgcaggctgcgccggaagcggccgtgcccgagagcacgcccgaggtc
gcagcaagcaacgtgccggtcgaacccgcgccgcagactgaggagatgccaagcgagccg
ccgccatcgcacgatgcgcaggccggcatcgccctgttcgacgccttcgccgagccggtc
gaaacaattgcggccgcggcactgccacagggcgaggcggcagcggagatcgcaacggac
gagcaagccgccgcggatctggtcgaggagaccgtgccagaaccggagccggacgcgcac
gagcagagcgctgacgtcgcgccaaagactccggttgaaaacccgcatcaagccatcgtg
tcgccgcaggctgcgccgatcacatcgggcatggtcgagccgtcgtcgggtcgggaaacg
tcgggccatgagccgcccgcaccgcgtcagcatccgctgcgcttcctctggcagttggat
gcagagagtcgctttgtgcttctctccgacgaattcatccacctgatcggcgcgcgcacc
gcctcagccttcggccgcccctggcacgacatcgccgggcaattgtcgctcgatcctgat
ggccgcgtcgcagaggcgcttgcaagccacgacacctgggccgggatcaccgtgaactgg
ccggccgacggcgacgaacatctgccggtcgagctcgcgggcctgccggtctacgattcc
tcgcgcaacttcgcgggcttcaagggctttggcgtctgccgcgatctcgacggcctcaac
cgactggaagcgctgaggcgttttgaactggtggccgagccgccggcgcagcacgcccta
ccagccgaaccggtcgcgcccgaggccgagccgctcgcggaggcgccgcctccgccgatc
gagccgcccgcatccgagcccgagccgacacccgaacctgaactgccagagcccaccagc
gacgcgaattcacactcaaccgatccggacagacaagtggaaacgccagtcgaaacccct
ccgaatgtcgtgccgttccgccagcacggcgatgtcagatcactcaatgatcagagatcg
ccgacgctgacgccggtcgagaacagtgcgttcaacgagctcgcccggcaattgtccgaa
cggctcgaacgcgagcgcgagacgatcgccactgaggcttccgagcccgtggtggagatc
accaccgagccgccggcgccggagcccgagccgcagcacactgcggccgaatggctgacc
gagcccgcgccaccgccacgcggcgcgagcgcgcgcgaccgcaccctgctcgacctgttg
ccgacgggcatcctgatctaccggctcgaccgcctgctctacgccaacccggcgtttctc
gcgcgcatgggctatgccggcctgagcgcgctggaggacgccggcgggctcgatgcgctc
tatgtcgaacccggcgtgtccttggccagcagcacctcgcaagccggcacgcctgtcacg
atcagcgcgacgctcgcgaccggcgagcagccgcttgcaaccacggaagcgcatctgcac
acgatcgactgggacggcgagagcgcgcatgcgctgatctgcgcgctgccgcaggcatcg
cctgtcatcgccgagacgatcgttgccgaatccgtcgtcgccgaatccttcccctacgcg
cccgagctggactccacggccggcgaagccgaggccgaagatctcgccgcgatcctcgac
accacggccgagggcatcgtcatgttcgacgccgaaggcaacgtctacgcctgcaaccgc
agcgccgaggcgctgttcggctatgacggcgaagcgttgctccagcagaatttggtgacg
ctgttcgcgcccgagagccagcagatcgtcgtcgactatctcgagagcatgaagagccag
gatatcgcgagcctgctcgaccacggccgcgaggtgctgggacgcgagaagaagggcggc
gtcattccgctcgcgatgataatgggccgcacgcggcccgacggcccgaacttcttcgcc
gtgttccgcgatctctctcagagcaagaagggcgagaacgagctgacgcaggcccgccac
ctcgtccacagcgcggccaacgccaaggccgacatgctggcgcggatcagccacgagatc
cgcacgccgctcaacgccatcatcggctttgccgaggtgatgatctccgagcgcttcggc
acgctcggcaacgagcgctacggcgaatacatgaaggacatccgcgcctccggcgagcgc
gtcatcgcgatcatcgacgatctcttggagctgtcgcggatcgagaccggcaagctcgac
ctgaactttgcgaatttgaacctcaacgacctcgtcgaagcctgcgtgaccgtgatgcag
ccgcaggccaatcgcgagcgcatcatcatccgaacctcgcttgcgcatgcgctgccgcag
gtcacggcggacgcgcgcgcgatgcggcagatcacgatgaacctgatctcgaattcgatc
cggctcgccagcgccggcggccaggtcatcgtctcgaccgcgctgtccgaccgcggcgag
atcgcgcttcgcatccgcgacaccggccatggcctcagcgagcgcgaggtcgccgcagcg
atggagccgttccgcaccccgccgcccggcgatgccgccgacagtgcagcgctgagcctg
tcgctgaccaaggccctggtcgaagccaaccgcgcccgcttcaacatcaagagcgcgggc
aacggcacgctgatcgaagtggtgttcgcgccggtggtggcgggggcgtag
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