KEGG   Bradyrhizobium symbiodeficiens: CIT39_03160
Entry
CIT39_03160       CDS       T06284                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
bsym  Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:bsym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsym03021]
    CIT39_03160 (rpoH)
Transcription machinery [BR:bsym03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CIT39_03160 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 HTH_3 HTH_11 KORA HTH_7 GntR GP3_package HTH_23 HTH_28 HTH_20 HTH_Crp_2
Other DBs
NCBI-ProteinID: AWM05553
UniProt: A0A2U8Q5Y9
LinkDB
Position
complement(1298793..1299692)
AA seq 299 aa
MARTAALPVLNGESGLSRYLAEIRKFPMLEPQQEYMLAKRWREHDDRDAAHQLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKINALDEGDLRPDQVKIIAKRLGVTAQDVIDMNRRL
GGDASLNAPIRDDGEAGEWQDWLVDNTPNQEAMLAEHEEYDERRDALNGAMGVLNPRERR
IFEARRLADEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQSAVKGTIARAEQAALEAAH
NT seq 900 nt   +upstreamnt  +downstreamnt
atggcccgtaccgctgctttgccggtcctcaatggagaatccggcctttctcgttacctc
gccgagatccgcaagttcccgatgctggaaccccagcaggaatacatgctcgccaagcgt
tggcgcgagcatgacgatcgggacgcggcgcatcaactcgtcaccagccatctccgtctc
gtggccaagatcgccatgggctatcgcggctacggcctgccgatctccgaggtcgtctcg
gaaggcaatgtcggcctgatgcaggcggtgaagcgtttcgaacccgagaaggggttccgt
ctcgctacatacgccatgtggtggatcaaggcgtcgattcaagagtacatcctgcgttcc
tggtcgctcgtgaagatgggcaccactgcgaaccagaagaagctgttcttcaacctgcgc
aaggcgaagagcaagatcaacgcgctggatgagggcgatctgcgccccgaccaagtcaag
atcattgccaagcgtctcggcgtcacggcccaggacgtgatcgacatgaaccgccgcctc
ggtggcgacgcgtcgctcaacgcaccgatccgcgacgacggcgaagccggcgaatggcag
gactggctggtcgacaatacgcccaaccaggaagccatgctggccgagcacgaggaatat
gacgaacgccgggacgcgctgaacggcgccatgggcgtgctcaatccgcgcgaacgccgc
atcttcgaggctcgccgcctcgccgatgagccgatgacgctggaagacctcgctgccgag
ttcggcgtgtcgcgcgagcgcgtccgccagatcgaggtccgtgccttcgagaaggtgcag
tcagcggtcaagggcacgattgcaagggccgaacaggccgcgctggaagccgcgcactaa

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