Bradyrhizobium symbiodeficiens: CIT39_03475
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Entry
CIT39_03475 CDS
T06284
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIT39_03475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_03475
Transporters [BR:
bsym02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CIT39_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AWM05608
LinkDB
All DBs
Position
complement(1364617..1365666)
Genome browser
AA seq
349 aa
AA seq
DB search
MSLSRRSLLTSGSAALAAASWGWPTSSRAATSIVATTYPGSFDEAFRAVVGPAFKRTSDS
SVTFTPLLGVDQIGKIQASRNAPPFDVVLFDEGPLIPAIASGVLEKFPAEQSKSFADIPS
AFRHPDGYAPVVTCQLIGIAYNPKKITTPPTSWEDLWKPEYKGRVGITGLGSSLGTAFMV
EIAKLNGGSETNIEPAFEAIKKLLPNVGAIAASPGALAALFQQGEIDIAFNFWNNVALLA
AKGVDIAFAKPKSGAVVIRTSAQIVKNNQDPKLVLDYLDTVMSVAAQKGLEAAPWVMMPT
NSKVALTGANLTVAKSVDDLVANNVLLDWTKFQAMRGEWITRFSKEVKI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcctatcccggagatcgctgctcacctcaggttcggccgcgctcgcggcggcaagc
tggggatggccgacatcgtcgcgcgccgcgacctcgatcgtggcgacaacctatcccggc
agcttcgacgaagccttccgcgccgtggtcgggccggccttcaagagaaccagcgacagc
agcgtcacctttacgccgctgctcggtgtcgaccagatcggcaagatccaggcctcgcgc
aatgcgccgcccttcgacgtggtgctgttcgacgagggcccgctgatcccggcgattgcg
agcggcgtgctggagaagttcccggcggaacagtcgaaatcctttgccgacattccaagc
gcgttccgccatcccgacggttacgcccctgtcgtcacctgtcagttgatcggcatcgcc
tacaatccgaagaagatcacgacgccaccgacctcgtgggaagacctttggaagcccgag
tacaagggccgcgtcggcatcaccgggctcggctcgagcctcggcaccgccttcatggtc
gagatcgccaaactcaacggcggctcggagaccaatatcgagccggctttcgaagccatc
aagaagctgctgccgaacgtcggcgcgatcgcggcctcgcccggcgcgctggccgcgctg
ttccagcagggcgagatcgatatcgccttcaatttctggaacaacgtggcactgctggcc
gcaaagggcgtcgacatcgccttcgccaagccgaagtcgggcgccgtcgtgatccgcacc
agtgcgcagatcgtcaagaacaaccaggacccgaagctggtgctcgactatctcgacacc
gtgatgtcggtcgccgcgcaaaaggggctcgaggccgcgccctgggtgatgatgccgacc
aacagcaaggtggcgctaaccggcgcgaacctcactgtggccaagagcgtcgacgacctc
gtcgccaacaacgtgctgctcgactggaccaagttccaggcgatgcgcggcgaatggatc
acccgcttcagcaaggaagtgaagatctag
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