Bradyrhizobium symbiodeficiens: CIT39_04205
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Entry
CIT39_04205 CDS
T06284
Name
(GenBank) L,D-transpeptidase
Organism
bsym
Bradyrhizobium symbiodeficiens
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Motif
Other DBs
NCBI-ProteinID:
AWM05737
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Position
1520260..1521819
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AA seq
519 aa
AA seq
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MKDLMTTAQSSTAIRRCRPPGRVALAAVAVLTVLTASAEAAKQARQPAEAVAQRQAGEPI
MAIVSIKSQQVTFYDADGWILRAPVSTGTTGRETPAGVFAIVEKDKDHRSTMYDDAWMPN
MQRITWNGIALHGGPLPGYAASHGCVRMPFGFAEGLFDKTYIGMRVIISPQDTAPTEFSH
PSLFVPKPEAIAAAPGRADKLSAEAEQATQAAAEAKKAAAAAAKEAASLPASLRKLEQQK
ARADAELAFTDKKIAAAKSDQARAQAEELKLKVATKAADAASALDAAKAAAQSKRDAVAA
TKDAAKAAAVLKTEAVKAATDAKLAGEPVSVYISRSTQKLYVRRNTHKPAPDGGGEVFDT
SIEVPVTIRNPEQPLGTHIFTAMAKSDTGLRWSVVTIENGDEARNALDRITIPQDVWDRI
GPTALPRSSIIISDEPLSAETNYRTEFVAVLSDQPQGGFITRKPTAPAMIASDDGWDNGG
NGFGFFYQRDPYVQQANPRRQRGQYQYYQSTQPMQRSWW
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacctgatgacgacggcgcaatcctccacggcgatccggcgttgccggcccccc
ggacgtgttgcgctcgccgcggtcgccgtcctgacagtgctgaccgccagcgccgaagcg
gccaagcaggcacgccagccggccgaggcggtcgcacagcggcaggccggcgagccgatc
atggcgatcgtgtcgatcaagagccagcaggtcaccttctacgacgccgatggctggatc
ctgcgcgctccggtgtcgaccggcactacggggcgcgagacgccggccggtgtcttcgcc
atcgtcgagaaggacaaggaccaccgctcgaccatgtatgacgatgcctggatgccgaac
atgcagcgcatcacttggaacggcatcgcgctgcatgggggaccgctgcccggctatgcc
gcctcgcacggctgcgtgcgcatgccgttcggcttcgccgagggcctgttcgacaagacg
tatatcgggatgcgggtgatcatctcgccccaggatacggccccgaccgaattctctcac
ccctcgctcttcgtaccgaagccggaggccatcgcggccgctcccggccgggccgacaag
ctttccgcggaagccgagcaggcgacccaggctgccgccgaggccaaaaaggctgcggcc
gcggctgcgaaggaggcggcttcgcttcctgcgtctctgcgcaaactggaacagcagaag
gccagggccgacgccgaactcgccttcaccgacaagaagattgctgccgccaagtccgat
caggcgcgtgcgcaggccgaggagctcaagctgaaggtcgccaccaaggccgccgacgct
gcgtcggcgctcgatgccgccaaggccgccgcgcagtcgaagcgcgacgccgtggccgcg
acgaaggacgccgccaaggccgctgcagtcctgaagacagaggccgtcaaggccgcgacc
gacgcgaagctggcgggtgagcccgtctcggtctacatcagccgctcgacgcagaagctc
tatgtgcggcgaaacacgcacaagccggcgcccgacggcggcggcgaagtgttcgacacc
agcatcgaagtccccgtcacgatccgcaatcccgagcagccgctcggcacgcatatcttc
acggcgatggcgaagtccgatacgggcctgcgctggagcgtggtcacgatcgaaaacggc
gacgaggcccgcaatgcgctcgaccgcatcacgatcccgcaggacgtctgggatcgcatc
gggccgaccgcgttgccgcgctcctcgatcatcatctcggacgagccgctgagcgccgag
accaattaccgtaccgagttcgtcgcggtgttgagcgaccagccgcaaggcggcttcatc
acgcgcaagccgaccgcacctgccatgatcgccagcgatgacggctgggacaatggcggg
aacggcttcggcttcttctaccagcgtgacccctacgtacagcaggccaatccgcgccgg
cagcgcggccagtaccaatattatcagtcgacgcagccgatgcagcgaagctggtggtaa
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