Bradyrhizobium symbiodeficiens: CIT39_04560
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Entry
CIT39_04560 CDS
T06284
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00362
Benzoate degradation
bsym01100
Metabolic pathways
bsym01120
Microbial metabolism in diverse environments
bsym01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CIT39_04560 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
CIT39_04560 (pcaH)
Enzymes [BR:
bsym01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
CIT39_04560 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AWM05800
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Position
1593114..1593902
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AA seq
262 aa
AA seq
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MNAQAPALRDPRLNRPEPLASPLGDGGFFQRDRSIHPPAHAPGYKSSVLRSPRQSLLSLE
GSVSEITGPVFGHNDLGPLDNDLIRNYAKDGDPVGERIIVHGRVLDETGRGVPNTLVEFW
QANAGGRYRHKKDTYLAPIDPNFGGCGRALTDDTGYYYFRTVKPGPYPWRNYVNSWRPAH
IHFSVFGSGFAQRLITQMYFEGDPLIPICPILTTIPDKDALDRLVAPLDLNASAPFDSLA
YRFDIVLRGQRSTYFENRTAGN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccaggcgccagccttgcgggatccccgcctcaaccgccccgagccccttgcg
tcgccgctcggcgacggcgggttcttccagcgggatcgttcgattcatccgccggcgcat
gcgccgggctacaaatcctcggtgctacgctcgccgcgccagtcgctgctgtcgctggag
ggttcggtctccgaaatcacgggaccggtgttcggccacaacgatctcggcccgctcgac
aatgatctgatccgcaactacgccaaggacggcgatcccgtcggcgagcgcatcatcgtc
cacggccgcgtgctggacgaaaccggtcgcggcgtgccgaacacgctggtcgagttctgg
caggccaatgccggcggccgctaccggcacaagaaggacacctatctggcgccgatcgat
ccgaatttcggcggctgcggccgcgcgctgaccgacgacaccggctactactatttccgc
accgtgaagccggggccctatccctggcgcaactatgtcaacagctggcgtcccgcccat
atccacttctcggtgttcggttcgggctttgcacagcggctgatcacgcagatgtatttc
gagggcgatcccctgatcccgatctgtccgatcctgacgaccatcccggacaaggatgca
ctcgaccgcctcgtggcgcccctcgacctcaacgcctcggcgccgttcgactcgctggcc
taccgcttcgacatcgtgctgcgcggccagcgctccacttattttgaaaatcgcaccgcg
gggaactga
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