Bradyrhizobium symbiodeficiens: CIT39_05180
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Entry
CIT39_05180 CDS
T06284
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00051
Fructose and mannose metabolism
bsym00541
Biosynthesis of various nucleotide sugars
bsym01100
Metabolic pathways
bsym01250
Biosynthesis of nucleotide sugars
Module
bsym_M01006
GDP-D-Rha4N biosynthesis, Fru-6P => GDP-D-Rha4N
bsym_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
CIT39_05180 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CIT39_05180 (gmd)
Enzymes [BR:
bsym01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
CIT39_05180 (gmd)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
DUF6715
Motif
Other DBs
NCBI-ProteinID:
AWM05899
UniProt:
A0ABX5W021
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All DBs
Position
1777751..1778821
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AA seq
356 aa
AA seq
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MAERIALITGVTGQDGAYLAEYLLSLGYVVHGVKRRSSSFNTARVDHLYQDPHLGNVPFL
MHYGDMTDSTNLIRLVQQIRPTEIYNLAAQSHVAVSFESPEYTANADAVGVLRLLEAIRI
LGMEKDTRFYQASTSELYGLVQEIPQKETTPFYPRSPYGVAKLYGYWITVNYREAYGMFA
SNGILFNHESPVRGETFVTRKITRGVARIEVGLEETLYLGNLEAKRDWGHAQDYVEGMHM
ILQADEPDDFVLATGELHSVREMVELAFAEVSREIVWHGKGVEEIGIDARSGKIAVKIDP
AYFRPTEVDLLVGDASKARQVLGWKPKRSFIQLVGEMIASDLAEAKRDAAHEQRTL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacggatagctctcatcaccggggtaaccgggcaggacggcgcctatctcgca
gagtatctgctgtcgctcggctacgtcgtgcacggcgtcaagcgacgttcgtcgtccttc
aataccgcgcgtgtcgatcatctctatcaggatccacatttgggcaacgtgccgttcctg
atgcactacggggacatgaccgattcaaccaatctgatccgcttggtccagcagatccgg
ccgactgaaatctacaatcttgccgcccaaagtcacgttgccgtcagcttcgagagcccc
gagtatactgccaatgctgatgcggtcggcgtgctgcgtttgttggaggcgatccgcatt
ctcggtatggagaaggacacccggttctatcaagcctcgacgtcggagctttacggtctc
gtccaggagattccgcaaaaggagacaacgcccttctacccccgttcaccttacggagtg
gcaaaactctacggttattggatcaccgtgaactatcgtgaagcttacggcatgttcgcc
tctaatggcattctgttcaatcatgagagcccagtcaggggcgagacattcgtgacccgc
aaaattacccgaggcgtagcgcgcattgaggttggtcttgaggagacactctatcttggt
aacctcgaggccaagcgcgattggggccacgcgcaggattatgttgagggcatgcacatg
atccttcaggccgatgagcctgacgatttcgtgctcgccaccggtgagctgcattcggtg
cgcgagatggtagagttggcctttgcggaagtgagccgtgagatcgtatggcacggtaag
ggggtcgaggagatcggcatcgacgccagaagcggcaagatcgctgtaaagattgatcca
gcctatttccgtcctactgaagtcgacctcctcgttggagacgcaagcaaggcgcgccag
gtgcttggctggaagccgaagcggagctttattcagctggtcggggagatgatagcgagt
gatctcgccgaagcgaaacgggacgcagcacatgaacagcgtaccctttga
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