Bradyrhizobium symbiodeficiens: CIT39_05400
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Entry
CIT39_05400 CDS
T06284
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00071
Fatty acid degradation
bsym00280
Valine, leucine and isoleucine degradation
bsym00310
Lysine degradation
bsym00362
Benzoate degradation
bsym00380
Tryptophan metabolism
bsym00410
beta-Alanine metabolism
bsym00640
Propanoate metabolism
bsym00650
Butanoate metabolism
bsym00907
Pinene, camphor and geraniol degradation
bsym00930
Caprolactam degradation
bsym01100
Metabolic pathways
bsym01110
Biosynthesis of secondary metabolites
bsym01120
Microbial metabolism in diverse environments
bsym01200
Carbon metabolism
bsym01212
Fatty acid metabolism
Module
bsym_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CIT39_05400
00650 Butanoate metabolism
CIT39_05400
09103 Lipid metabolism
00071 Fatty acid degradation
CIT39_05400
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CIT39_05400
00310 Lysine degradation
CIT39_05400
00380 Tryptophan metabolism
CIT39_05400
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CIT39_05400
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CIT39_05400
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CIT39_05400
00930 Caprolactam degradation
CIT39_05400
Enzymes [BR:
bsym01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CIT39_05400
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CIT39_05400
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CIT39_05400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
Pyr_redox_2
ApbA
Motif
Other DBs
NCBI-ProteinID:
AWM05940
LinkDB
All DBs
Position
1825182..1827296
Genome browser
AA seq
704 aa
AA seq
DB search
MDSKIMTALGDRVLELGPKPATDIPYKHLKLTRDEDGVAWLLFDRADASANTLSSDVMEE
FDAVLAVIETERPAGLVIRSAKPSGFIAGADVNEFRGASDPGIASDPEMVETRIRAAHAV
VDHLEALNLPTVAVIHGFCLGGGLEVALACQSRIAIDGARFGFPEVMLGLHPGLGGTARF
TALVNPTQSMALMLTGRTIDARRAKSLGLVDTVTQERHVRGAVKDALFGRLKRAKPGLLT
RAANFGFVRGLLAKRMRSEAAKAASREHYPAPYALIDLWETHGGSKAAMLKAEQASFARL
MVTPTAQNLIRVFFLREQMKKAAGSGNAIKHVHVIGAGAMGGDIAAWVAGQGLRVSLADM
KAEPIAGAVKRAAELYGKIIRKPTEVRDALDRLIPDMDGEGVRNADLVIEAVPEKLELKQ
KVYAGLEPRMKPGAILATNTSSIPLQDLRTTLARPERLVGLHFFNPVSRLQLVEVVSHDG
NAPQVLKEALAFVGVIDRLPLSVKSSPGFLVNRALTPYMLEAMVMLDEKIDQRLIDAAAE
QFGMPMGPIELADQVGLDICLDVGDMLRTKFGDLLPPTPAWLREKVAKGELGRKTGKGFY
TWKDGKAEKAPLPETGPRVTDQMIDRLMLPMSNVCVAALREGIVDDPDAVDGAMIFGTGY
APFRGGPLNYARSRGVENVVSTLRALAGRFGERFAPDPGWDNFK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaagatcatgaccgcgctgggcgaccgcgtgctggagctgggacccaagccg
gcgacggacattccgtacaagcaccttaagctcacgcgcgatgaggacggcgtggcctgg
ctgctattcgaccgcgcggacgccagcgccaacacactgtcctcggacgtgatggaggag
ttcgacgccgtgctcgcggtgatcgagaccgaacgtccggccggcctcgtcatccgctcc
gccaaaccatccggcttcatcgccggcgccgacgtcaacgaattccgcggtgccagcgat
cccgggatcgccagcgatcccgagatggtcgagacgcgcatccgcgccgcgcatgcggtg
gtcgatcatctcgaagccttgaacctgccgacggtcgccgtgatccacggcttctgcctc
ggcggcggcctcgaggttgcgctcgcctgccagtcgcgcatcgcgatcgacggggcgcgc
ttcggcttcccggaggtgatgctcggcctgcatcccggcctcggcggcaccgcgcgtttc
accgcgttggtcaatcccacccaatcgatggcgctgatgctgaccggccgcaccatcgat
gcgcgccgcgccaaatcgctcggcctcgtcgacaccgtgacgcaggagcgtcatgtccgg
ggcgcggtgaaggacgcactgttcggccggctgaagcgggccaagcccggcttgctcacg
cgtgcggccaatttcggcttcgtgcgcggtctcctggcgaagcgcatgcggtcggaggcg
gcgaaggcggcgtcccgggagcattatccggcgccttacgcgctgatcgatctctgggag
acccatggcggcagtaaggccgcgatgctgaaggcagagcaggcttcgttcgccaggctg
atggtgacgccgaccgcccagaacctgatccgggtcttcttcctgcgcgagcagatgaag
aaggcggccggcagcggcaacgccatcaagcacgttcacgtcatcggcgccggcgccatg
ggtggcgacatcgcggcttgggtagccgggcaggggctgcgcgtctcgctcgccgacatg
aaagccgagccgatcgcgggcgccgtgaagcgcgccgccgaactctacggcaagatcatc
cgcaaaccgacggaggtgcgcgacgcgctcgatcgtctgatccccgacatggatggggag
ggcgtccgcaatgccgatctcgtcatcgaggcggtgccggaaaagctcgagctcaaacag
aaggtctatgccggcctcgagccgcggatgaaaccgggggcaatccttgccaccaacact
tcgagcattccgcttcaggatctgcgcaccacgctggcgcggccggagcggctggtcggc
ctacacttcttcaatccggtgtcgcggctgcaactggtcgaggtcgtcagtcacgacggc
aacgccccacaggtgctgaaggaggcgctggctttcgtcggcgtgatcgatcgcctgccg
ctatcagtgaagagctcgcctggattcctcgtcaaccgcgcgctgacgccgtacatgctc
gaagccatggtgatgctggacgagaagatcgaccagcgcctgatcgacgccgcggccgaa
cagttcggcatgccgatggggccgatcgaactcgccgaccaggtcgggctcgacatctgc
ctcgacgtcggcgacatgctgcgcacaaagttcggtgacctcctgccgcccacacccgca
tggttgcgcgaaaaagtcgccaagggcgagctcggccgcaagaccggcaagggcttttat
acctggaaggacggcaaggccgagaaggcaccgctccccgagaccggtccgcgcgtcacc
gaccagatgatcgaccgcctgatgctgccgatgtccaatgtctgcgttgcggcccttcgc
gagggcatcgtcgacgatcctgatgcggtcgacggcgccatgatctttggtaccggctac
gcaccgttccgcggcggtcccctgaattacgcgcgctcgcgcggggtggagaatgtcgta
tccaccctgcgcgcgctggccggacgattcggcgagcgtttcgcgcccgatccgggctgg
gacaatttcaagtga
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