Bradyrhizobium symbiodeficiens: CIT39_05575
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Entry
CIT39_05575 CDS
T06284
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsym02000
]
CIT39_05575
Transporters [BR:
bsym02000
]
Other transporters
Pores ion channels [TC:
1
]
CIT39_05575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AWM05970
LinkDB
All DBs
Position
complement(1858984..1861353)
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AA seq
789 aa
AA seq
DB search
MSFQSRRAQRLGGASLLLLGAAATPAFAQTPAQDKSSSEIPAVTVTAPSPIVRRAVVPSR
NPGRGTRTARVRSRQQTAEAEPAASVPTAPQQGVLSVVTNQFATVTVVPNEEIRREGGGQ
LGDLLFSKPGITGSSFAPGASSRPIIRGLDVNRVGIVENGTNASGASDLGEDHFVPIDPL
ATNQIEVVRGPAALRYGSTSIGGVVSATNNRIPDALPACAPSFQAYGLPTKAPLASAATS
PCVTAETRTAFSSVDRGVESGVLLDTGGGNFAFHADAYGRTTSDYSIPSYPYLNDQTRAV
NGRQPNSATRSDGASIGGSYFFQGGYIGASITQNDSLYHIPGIDGADHQTRIDGHQTKIN
VKGEYHPDAAAIDAVRFWAGATDYRHNEIGLADPADLNSDGIRQTFTNKEQEIRTEVQLM
PFNARFAEVTTALGFQVGHQELSAPSPDNPGTLFNGLWDPNNSNRVAGYAFNEFMFTEAT
RAQIAGRIEHVELHGTTPDFPADYLPDGTPQAGIARNPSFTPKSGSIGLLQDLPGGMVGS
ITAQYVERAPKAAELFSRGGHDATATFDIGNPNLTIETAKSVELGVRRATGPFRFEATVY
YTHFDNFIYRRLTGVSCDDDFASCGNPGAELNQAVYSQRNANFRGGEFQSQLDVAAFQGG
IWGIENQFDFVRATFSDGTNVPRIPPMRMGGGVFWRDDNWLMRVNLLHAFAQNNVAAIAE
TPTAGYNLLKAEVSYKTKLDRNWFGAREMMAGIVGNNLLNENIRNSVSYTKDEVLMPGIG
VRAFANFKF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcaatcgcgacgcgcgcagcgtcttggcggagcaagcctgctcctgctcggt
gccgccgccacgcccgctttcgcccaaacgcctgcgcaagacaaatcgtcgagcgaaatc
cccgccgtcaccgtgacggcgccgagccccatcgtgcgcagagcggtggtgccgtcgcgc
aatcccggccgcggcacgcggaccgcgcgggtgcgcagccgccaacaaacggcggaagcg
gagccggcagcctccgtgcccaccgcgcctcagcagggcgtgctgtcagtcgtgaccaac
cagttcgcgacggtcaccgtggtgcccaatgaggagatccgccgcgagggcggcggccag
ctcggcgatctcctgttctccaagccaggcatcaccggatcgagcttcgcgcccggcgca
tcgagccggccgatcatccggggtctcgacgtcaaccgcgtcggcatcgtcgagaacggc
accaatgcgagcggcgcctccgatctcggcgaggatcatttcgttccgatcgatccgctc
gcgaccaaccagatcgaagtggtgcgcgggcccgccgcgctgcgctacggctcgacctcg
atcggcggcgtcgtcagcgccaccaacaaccggattccagacgcgctacctgcctgcgcg
ccgtcattccaggcttacggactgccgaccaaagctccgctcgcgagcgccgcgacctcg
ccttgcgtcaccgccgagacccgcaccgcgttctcttcagtcgatcgcggcgtcgagagc
ggcgtgctgctcgacaccggcggcggcaatttcgccttccacgccgacgcctatggccgc
acgacctcggactattccatcccgagctatccctatctgaacgaccagacgcgcgccgtg
aacggccgccagccgaactcggcaacgcgctcggacggcgcctcgatcggcggctcctat
ttcttccagggcggctatatcggcgcgtcgatcacccagaacgactcgctctaccacatc
cccggcatcgacggcgccgaccaccagacacggatcgacggccaccagaccaagatcaac
gtcaagggcgagtaccatcccgacgccgccgcgatcgacgcggtgcgcttctgggccggt
gcgaccgattaccggcacaacgagatcgggcttgccgatccagccgacctcaacagcgac
ggcatcaggcagaccttcaccaacaaggagcaggagatccgcaccgaggtgcagctgatg
ccgttcaacgcgcgcttcgccgaagtgacgacggcgctgggcttccaggtcggccatcag
gaattgagcgcgccgagcccggataatcccggcacgctgttcaacggcctatgggatccg
aacaacagcaaccgcgttgccggctacgccttcaacgagttcatgtttaccgaggcgacg
cgggcgcagatcgccggccgcatcgagcatgtcgagctgcacggcacgacgccggacttc
ccggccgattatttgcccgacggcacgccgcaggcgggcatcgcgcgcaatccgtcgttc
acgccgaagagcggcagcatcggcctgttgcaggacctgcccggcggcatggtcggcagc
atcaccgcgcaatatgtcgagcgcgcgccgaaggcggccgagctgttttcccgcggcggc
cacgatgcgactgcgaccttcgacatcggcaatccaaacctcacgatcgagaccgccaaa
tcggtcgagctcggcgtgcgcagggcgacggggccgttccgcttcgaggcgaccgtctac
tacacgcatttcgacaatttcatctaccgccgcctcaccggcgtgtcctgcgacgacgac
ttcgcatcctgcggcaatccgggcgcggagctgaaccaggcagtgtattcgcagcgcaat
gccaatttccgcggcggcgaattccagtcgcagctcgacgtcgccgccttccagggcggc
atctggggcatcgagaaccagttcgatttcgtccgcgccaccttcagcgacggcaccaac
gtgccgcggattccgccgatgcggatgggcggcggcgtgttctggcgcgacgacaactgg
ctgatgcgcgtcaacctgctgcacgccttcgcgcagaacaacgtcgctgcgatcgcggag
acgccgacggcgggctataatttgttgaaggccgaggtcagctacaagaccaagctcgac
cgcaactggttcggtgcgcgcgagatgatggccggcatcgtcggcaacaacctcctcaac
gagaacatccgcaactccgtatcctacaccaaggacgaggtgctgatgcccggcatcggc
gtcagggcgttcgcgaacttcaagttctag
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