Bradyrhizobium symbiodeficiens: CIT39_05620
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Entry
CIT39_05620 CDS
T06284
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIT39_05620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsym03019
]
CIT39_05620
Enzymes [BR:
bsym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CIT39_05620
Messenger RNA biogenesis [BR:
bsym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CIT39_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AWM05979
LinkDB
All DBs
Position
1870692..1871960
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AA seq
422 aa
AA seq
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MSAEPIFAPILADAPWLTAGGTARVLQLLNADGEEARVVGGAVRNALLGLTPGDIDIATT
ARPEEVIRRAKAAGIKSVPTGIDHGTVTLVIDSHPYEVTTLREDTETFGRKAKVAFGRDW
VKDAERRDFTMNGLSVDARGVVYDHVGGIADAKARRVRFIGDPDQRIAEDYLRILRFFRI
HAAFGAGDPDRDGYLACIRGRAGLANLSAERVRMEMLKLLVAGGASAAVLAMAEGGLLQA
LTGGVAYTGPLSAMIAIERELGLAASSTRRLAALTVAVTEDAKRVAARLRLSNAETKALD
SMGHRWWRFATKDEANGRRLLYRLGPERYHDRVLLGWARAGGDVTSTHWRALAELPQRWT
APKFPLKAADFIARGLAEGPALGHVLTLAEDAWLAADFPLDDAALATIADQAAARISRDE
RT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagccgatatttgccccgattcttgccgatgcgccctggctgaccgcaggc
gggaccgcgcgcgtcctgcaattgctcaacgctgacggcgaagaggcgcgggtggtcggc
ggcgccgtgcgcaacgcgctgctcggcctgacgcccggcgacatcgacatcgcgaccacg
gcgcggccggaggaggtgatccggcgcgccaaggctgccggcatcaagagcgtgccgacc
ggcatcgaccacggcacagtcacgctggtcatcgacagccacccctatgaagtcaccacg
ctgcgcgaggacaccgagaccttcggccgcaaggccaaggtcgcgttcggacgcgactgg
gtgaaggacgccgagcggcgcgacttcaccatgaacggcctgtcggtcgatgcgcgcggc
gtcgtctacgaccatgtcggcggcatcgcggatgccaaagcgcgccgcgtgcgcttcatc
ggcgatcccgaccagcgcatcgcggaggattatctgcgtatcctgcgcttcttccgcatc
cacgccgccttcggtgccggcgatcccgaccgcgacggctatctcgcttgcatccggggg
cgtgcgggtctggccaacctctcggccgagcgggtgcggatggagatgctgaagctgctg
gtggccggcggcgcgtccgcggcagtgctggccatggccgagggcggattgctgcaggcg
ctgaccggcggcgtcgcctataccgggccgctgtcggcgatgatcgcgatcgagcgcgag
ctcggcctcgctgcaagcagcacgcggcgcctcgccgcgctgaccgtcgccgtgaccgaa
gatgccaagcgggtcgccgcgcggctgcggctctccaatgccgaaaccaaggcactggat
tcgatgggccatcgctggtggcgcttcgccaccaaggacgaggccaatgggcggcgtctg
ctctatcggctcggccccgaacgttatcacgatcgtgtgttgctgggctgggcgcgggcc
ggtggcgacgtcacctcgacgcactggcgcgcgctcgccgaactgccgcagcgctggact
gcgccgaaatttccgctcaaggccgccgacttcatcgcgcgcggtctggcggagggaccc
gcgcttggacatgtgttgacgctcgccgaggacgcttggcttgcggcggattttccacta
gatgatgccgcgctcgctaccatcgccgatcaagctgcggcccgcatcagccgcgatgag
agaacgtga
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