Bradyrhizobium symbiodeficiens: CIT39_06900
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Entry
CIT39_06900 CDS
T06284
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
bsym
Bradyrhizobium symbiodeficiens
Pathway
bsym00740
Riboflavin metabolism
bsym00790
Folate biosynthesis
bsym01100
Metabolic pathways
bsym01110
Biosynthesis of secondary metabolites
bsym01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
CIT39_06900 (ribB)
00790 Folate biosynthesis
CIT39_06900 (ribB)
Enzymes [BR:
bsym01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
CIT39_06900 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
CIT39_06900 (ribB)
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
AWM06198
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Position
2158777..2159853
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AA seq
358 aa
AA seq
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MPDSVQEVLQAFARGELVVVTDDDDREGEGDLIVAASLCTAEKMAFIIRHTSGIVCAPVT
SEDARRLRLDPMVAHNDSAHTTAFTVSIDYKPDGGTGISAEERASCCRALSNPNAGANDF
ARPGHIFPLIAKDGGVLLRSGHTEAAVDLCKLSGLPPVGVISELMNDDGSVMKGEQVARF
AAQHKLKHVTIADMIAYRQAREKLIERVSTFVTESPIGPLQGYAYRSPFDSIAHVAFVYN
GVGDGKNVLTRFHKPNIVKDIFTGHKRMAAVLEQFKKSGRGVLVYLRDGAAGVPVAALPD
ESASEADRNRQWREVGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVANEQLES
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatagcgtccaggaagtcttgcaggcctttgcccggggtgagctcgtcgtcgtc
accgacgacgacgaccgtgagggcgagggcgacctcatcgtcgccgcctcgctctgcacc
gccgagaagatggcgttcatcatccgccacacctccggcatcgtctgcgcgcccgtgacc
tccgaggacgcacgtcggctgcggctcgatccgatggtcgcccacaacgattccgcgcac
accacggcgttcacggtgtcgattgactacaagcccgacggcggcaccggcatctcggcc
gaggagcgcgcctcctgttgccgcgcgctgtccaatcccaatgccggcgccaatgatttc
gcacgccccggccacatcttcccactgatcgccaaggacggcggcgtgctgctgcgctcg
ggccataccgaggccgcggtcgatctctgcaagctctccggcctgccgccggtcggcgtc
atcagcgaattgatgaacgacgacggcagcgtgatgaagggtgagcaggtcgcccgcttc
gccgcccagcacaagctcaagcacgtcaccatcgcggacatgatcgcctaccgccaggcg
cgcgagaagctgatcgagcgggtctcgaccttcgtcaccgaaagcccgatcggccccttg
cagggctatgcctatcgttcgccgttcgattccatcgcccacgtcgcgttcgtctacaac
ggcgtcggcgacggcaagaacgtgctgacgcgctttcacaagccgaacatcgtcaaggac
atcttcaccggccacaagcgcatggccgccgtgctcgagcaattcaagaagtccggccgt
ggcgtgctggtctatttgcgcgacggcgcggccggtgtgcccgtggcggcgctgccggac
gagtctgcgtcggaagccgaccgcaaccgccagtggcgcgaggtcggcgtcggcgcgcag
atcctgcgcgacctcggcgtcacttcgatccggcatctcacctcctcggtgcacgactac
aagggcctgtcgggcttcggcatcgagatcgtcgccaacgagcagctcgaaagctga
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